| Protein: | MYB4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 282 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MYB4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
324.0 | [0..1] | [282..1] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MGRSPCCEKA HTNKGAWTKE EDERLVAYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60
61 LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT DNEIKNYWNT HIRRKLIN
|
| Detection Method: |  |
| Confidence: | 33.522879 |
| Match: | 1a5jA |
| Description: | CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [119-221] |
1 11 21 31 41 51
| | | | | |
1 RGIDPTSHRP IQESSASQDS KPTQLEPVTS NTINISFTSA PKVETFHESI SFPGKSEKIS 60
61 MLTFKEEKDE CPVQEKFPDL NLELRISLPD DVDRLQGHGK STT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.335 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.331 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.213 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [222-282] |
1 11 21 31 41 51
| | | | | |
1 PRCFKCSLGM INGMECRCGR MRCDVVGGSS KGSDMSNGFD FLGLAKKETT SLLGFRSLEM 60
61 K
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.737 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.670 | N/A | N/A | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.644 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.543 | N/A | N/A | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.537 | N/A | N/A | d.52.1 | Alpha-lytic protease prodomain |
