| Protein: | ZHD1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 279 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZHD1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
125.0 | [0..113] | [276..38] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MEFEDNNNNN DEEQEEDMNL HEEEEDDDAV YDSPPLSRVL PKASTESHET TGTTSTGGGG 60
61 GFMVVHGGGG SRFRFRECLK NQAVNIGGHA VDGCGEFMPA GIEGTIDALK CAACGCHRNF 120
121 HRKELPYFHH APPQHQPPPP PPGFYRLPAP VSYRPPPSQA PPLQLALPPP QRERSEDPME 180
181 TSSAEAGG
|
| Detection Method: |  |
| Confidence: | 37.443697 |
| Match: | PF04770.3 |
| Description: | No description for PF04770.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [189-279] |
1 11 21 31 41 51
| | | | | |
1 GIRKRHRTKF TAEQKERMLA LAERIGWRIQ RQDDEVIQRF CQETGVPRQV LKVWLHNNKH 60
61 TLGKSPSPLH HHQAPPPPPP QSSFHHEQDQ P
|
| Detection Method: | |
| Confidence: | 11.69897 |
| Match: | 1wh7A |
| Description: | Solution structure of homeobox domain of Arabidopsis thaliana hypothetical protein F22K18.140 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
