| Protein: | gi|18377743, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 772 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18377743, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
400.0 | [0..40] | [769..2] |
|
Region A: Residues: [1-221] |
1 11 21 31 41 51
| | | | | |
1 MSILPPPIIQ GHNSSSPSSD SSLNPSSEHG NNSSSSLSPL PSSPPSRISS STGTRFSGHS 60
61 ESSHNFSGGS REPSVAAEEG HSRGSSKEMT QNGAGKESFS PPNADKRDHF RYDGRRNRSR 120
121 GRGTGAAGSS SSQLQHNSGP FNSPRGGVSH HNPTGRRANM ISGNHLLNFQ YDPISQPQSR 180
181 GPPPPQRRQQ YKGRPFNKDL FLKANYKFVV LDTGDHSPDS M
|
| Detection Method: |  |
| Confidence: | 11.69897 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [222-343] |
1 11 21 31 41 51
| | | | | |
1 DPDKMLQWDD IICVRYSTPS PVQCPICLEY PLCPQITSCG HIFCFPCILQ YLLTGVDNHK 60
61 VDCFKRCPLC FVMISPRELY TVYIENVKQY SVGDPIEFVL LTRKKDSFAP TRKNEHDLAV 120
121 PN
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1rmdA |
| Description: | RAG1 DIMERIZATION DOMAIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [344-658] |
1 11 21 31 41 51
| | | | | |
1 GENEIYDPFS KFTFTQDVDL SVRQAVSELD SWIARADPQL VEDLEKHLYV NAALERLEQR 60
61 KLYWNEHKLS IYSKVCTTAR NQTQSLSPPD VSRVGYQAPM GGHGAPDSGS NDQDKSTEDS 120
121 SADKSDGESQ SSLEKGCDND LGHPLEDQDA PSSSSCNGSK GFLSHQIDTK DLKDNDAYNF 180
181 YQSVDGQHII LHTLNVKCLL HHYGSYDFLP PRLSGKILEM ETITQSEAIR RRYRFLSHFS 240
241 LSTTLQICEI DMKESLPPDA FAPFIHEIKK REKQRKERAW KDRKNKIKAE VAAAAELVPL 300
301 MASFGQSSSS DDFPP
|
| Detection Method: | |
| Confidence: | 11.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [659-772] |
1 11 21 31 41 51
| | | | | |
1 FSLDDFEALG NSAPISSSPP NIGERSSFSH VTRLGFAAGH DSPNLNNEPT NVQSSSSSSE 60
61 VSNATTGARN TNITSFASVA SRTTTPMAPT VKEPGKRGKK QSRVLLSTTS VRRY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
