| Protein: | E2FB_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 469 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for E2FB_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
504.0 | [0..1] | [469..1] |
|
|
419.0 | [0..2] | [469..4] |
|
|
384.0 | [0..4] | [460..2] |
|
|
384.0 | [0..7] | [465..11] |
|
|
379.0 | [0..23] | [461..1] |
|
|
375.0 | [0..7] | [465..2] |
|
|
370.0 | [0..7] | [457..5] |
|
|
366.0 | [0..55] | [460..32] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MSEEVPQQFP SSKRQLHPSL SSMKPPLVAP GEYHRFDAAE TRGGGAVADQ VVSDAIVIKS 60
61 TLKRKTDLVN QIVEVNELNT GVLQTPVSGK GG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.404 | N/A | N/A | a.60.7 | 5' to 3' exonuclease, C-terminal subdomain |
| View | Download | 0.404 | N/A | N/A | a.60.7 | 5' to 3' exonuclease, C-terminal subdomain |
| View | Download | 0.343 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.343 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.305 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.305 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.299 | N/A | N/A | d.58.58 | Description not found. |
| View | Download | 0.291 | N/A | N/A | d.79.3 | L30e-like |
| View | Download | 0.263 | N/A | N/A | a.81.1 | N-terminal domain of DnaB helicase |
|
Region A: Residues: [93-194] |
1 11 21 31 41 51
| | | | | |
1 KAKKTSRSAK SNKSGTLASG SNAGSPGNNF AQAGTCRYDS SLGLLTKKFI NLIKQAEDGI 60
61 LDLNKAADTL EVQKRRIYDI TNVLEGIGLI EKTLKNRIQW KG
|
| Detection Method: | |
| Confidence: | 23.0 |
| Match: | 1cf7A |
| Description: | Cell cycle transcription factor E2F-4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [195-397] |
1 11 21 31 41 51
| | | | | |
1 LDVSKPGETI ESIANLQDEV QNLAAEEARL DDQIRESQER LTSLSEDENN KRLLFVTEND 60
61 IKNLPCFQNK TLIAVKAPHG TTLEVPDPDE AGGYQRRYRI ILRSTMGPID VYLVSQFEES 120
121 FEDIPQADEP SNVPDEPSNV PDVPSNLPST SGLPENHDVS MPMKEESTER NMETQEVDDT 180
181 QRVYSDIESH DFVDGIMKIV PPD
|
| Detection Method: | |
| Confidence: | 37.154902 |
| Match: | 2azeA |
| Description: | Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [398-469] |
1 11 21 31 41 51
| | | | | |
1 LDMGVDYWFR SEVGEVSITD MWPDESGPDW NQMITFDQDH AGPSDNKILE QPQTPSSPTP 60
61 EESTATRSPT GS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.574 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.475 | d.15.1 | Ubiquitin-like |
| View | Download | 0.475 | d.15.1 | Ubiquitin-like |
| View | Download | 0.438 | d.15.1 | Ubiquitin-like |
| View | Download | 0.412 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.401 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.400 | d.15.1 | Ubiquitin-like |
| View | Download | 0.386 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.313 | d.15.1 | Ubiquitin-like |
| View | Download | 0.302 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.297 | d.15.1 | Ubiquitin-like |
| View | Download | 0.241 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.218 | a.159.5 | Description not found. |
