| Protein: | PP153_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 579 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP153_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
469.0 | [0..138] | [579..307] |
|
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469.0 | [0..178] | [579..237] |
|
|
469.0 | [0..129] | [579..385] |
|
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460.0 | [0..177] | [579..300] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MSSLMAIRCA RTQNIVTIGS LLQLRSSFPR LSSQFHFSGT LNSIPIKHLS TSAAANDYHQ 60
61 NPQSGSPSQH QRPYPPQSFD SQNQTNTNQR VPQSPNQWST QHGGQIPQYG GQNPQHGGQR 120
121 PPYGGQNPQQ GGQMSQYGGH NPQHGGHRPQ YGGQRPQY
|
| Detection Method: |  |
| Confidence: | 7.30103 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [159-231] |
1 11 21 31 41 51
| | | | | |
1 GGPGNNYQNQ NVQQSNQSQY YTPQQQQQPQ PPRSSNQSPN QMNEVAPPPS VEEVMRLCQR 60
61 RLYKDAIELL DKG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.299 | d.58.17 | Metal-binding domain |
| View | Download | 0.299 | d.58.17 | Metal-binding domain |
| View | Download | 0.277 | d.300.1 | Description not found. |
| View | Download | 0.263 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.218 | a.28.1 | ACP-like |
| View | Download | 0.215 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
|
Region A: Residues: [232-579] |
1 11 21 31 41 51
| | | | | |
1 AMPDRECFVL LFESCANLKS LEHSKKVHDH FLQSKFRGDP KLNNMVISMF GECSSITDAK 60
61 RVFDHMVDKD MDSWHLMMCA YSDNGMGDDA LHLFEEMTKH GLKPNEETFL TVFLACATVG 120
121 GIEEAFLHFD SMKNEHGISP KTEHYLGVLG VLGKCGHLVE AEQYIRDLPF EPTADFWEAM 180
181 RNYARLHGDI DLEDYMEELM VDVDPSKAVI NKIPTPPPKS FKETNMVTSK SRILEFRNLT 240
241 FYKDEAKEMA AKKGVVYVPD TRFVLHDIDQ EAKEQALLYH SERLAIAYGI ICTPPRKTLT 300
301 IIKNLRVCGD CHNFIKIMSK IIGRVLIVRD NKRFHHFKDG KCSCGDYW
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
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