| Protein: | PCL1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 323 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PCL1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
235.0 | [0..2] | [317..60] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MGEEVQMSDY DVSGDGDRVS EWEMGLPSDE DLASLSYSLI PPNLAMAFSI TPERSRTIQD 60
61 VNRASETTLS SLRGGSSGPN TSSSNNNVEE EDRVGSSSPG SDSKKQKTSN GDGDDGGGVD 120
121 PDSAM
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 2cjjA |
| Description: | No description for 2cjjA was found. |
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [126-251] |
1 11 21 31 41 51
| | | | | |
1 AAEEGDSGTE DLSGKTLKRP RLVWTPQLHK RFVDVVAHLG IKNAVPKTIM QLMNVEGLTR 60
61 ENVASHLQKY RLYLKRMQGL TNEGPSASDK LFSSTPVPPQ SFQDIGGGGG SSGNVGVPIP 120
121 GAYGTQ
|
| Detection Method: | |
| Confidence: | 20.69897 |
| Match: | 1irzA |
| Description: | Arr10-B |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [252-323] |
1 11 21 31 41 51
| | | | | |
1 QMMQMPVYAH HMGMQGYHHQ NHNHDPYHQN HRHHHGAGGN GAFESNPYMM QQNKFGSMAS 60
61 YPSVGGGSAN EN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
