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View Structure Prediction Details

Protein: gi|26453248, gi|...
Organism: Arabidopsis thaliana
Length: 115 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|26453248, gi|....

Description E-value Query
Range
Subject
Range
MIF_MOUSE - Macrophage migration inhibitory factor OS=Mus musculus GN=Mif PE=1 SV=2
204.0 [0..1] [115..1]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTLNLFTNI PVDAVTCSDI LKDATKAVAK IIGKPESYVM ILLNSGVPIA FAGTEEPAAY  60
   61 GELISIGGLG PGVNGKLSET ISEILQIKLS IDSSRFYIKF YDSPRPFFGY NGSTF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.522879
Match: 1mfiA
Description: Microphage migration inhibition factor (MIF)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phenylpyruvate tautomerase activity 3.84932786282501 bayes_pls_golite062009
cytokine activity 2.80410252537768 bayes_pls_golite062009
intramolecular oxidoreductase activity 2.17252244354636 bayes_pls_golite062009
binding 1.9717928129965 bayes_pls_golite062009
receptor binding 1.79096938850925 bayes_pls_golite062009
protein binding 1.70051621352839 bayes_pls_golite062009
catalytic activity 0.836951613125537 bayes_pls_golite062009
isomerase activity 0.804529932513639 bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing C=C bonds 0.452407074010503 bayes_pls_golite062009

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