| Protein: | TRP3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 619 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRP3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
715.0 | [0..1] | [619..1] |
|
Region A: Residues: [1-255] |
1 11 21 31 41 51
| | | | | |
1 MVFKRKLDCL SVGFDFPNIP RAPRSCRRKV LNKRIDHDDD NTQICAIDLL ALAGKILQES 60
61 ESSSASSNAF EEIKQEKVEN CKTIKSESSD QGNSVSKPTY DISTEKCVVN SCFSFPDSDG 120
121 VLERTPMSDY KKIHGLMDVG CENKNVNNGF EQGEATDRVG DGGLVTDTCN LEDATALGLQ 180
181 FPKSVCVGGD LKSPSTLDMT PNGSYARHGN HTNLGRKDDD EKFYSYHKLS NKFKSYRSPT 240
241 IRRIRKSMSS KYWKQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [256-504] |
1 11 21 31 41 51
| | | | | |
1 VPKDFGYSRA DVGVKTLYRK RKSCYGYNAW QREIIYKRRR SPDRSSVVTS DGGLSSGSVS 60
61 KLPKKGDTVK LSIKSFRIPE LFIEVPETAT VGSLKRTVME AVSVLLSGGI RVGVLMHGKK 120
121 VRDERKTLSQ TGISCDENLD NLGFTLEPSP SKVPLPLCSE DPAVPTDPTS LSERSAASPM 180
181 LDSGIPHADD VIDSRNIVDS NLELVPYQGD ISVDEPSSDS KELVPLPELE VKALAIVPLN 240
241 QKPKRTELA
|
| Detection Method: | |
| Confidence: | 0.978 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0155013961187369 | bayes_pls_golite062009 |
|
Region A: Residues: [505-619] |
1 11 21 31 41 51
| | | | | |
1 QRRTRRPFSV TEVEALVQAV EELGTGRWRD VKLRAFEDAD HRTYVDLKDK WKTLVHTASI 60
61 SPQQRRGEPV PQELLDRVLR AYGYWSQHQG KHQARGASKD PDMNRGGAFE SGVSV
|
| Detection Method: | |
| Confidence: | 12.0 |
| Match: | 2ajeA |
| Description: | No description for 2ajeA was found. |
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
