| Protein: | SGT1B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 358 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SGT1B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
239.0 | [0..1] | [358..1] |
|
Region A: Residues: [1-358] |
1 11 21 31 41 51
| | | | | |
1 MAKELAEKAK EAFLDDDFDV AVDLYSKAID LDPNCAAFFA DRAQANIKID NFTEAVVDAN 60
61 KAIELEPTLA KAYLRKGTAC MKLEEYSTAK AALEKGASVA PNEPKFKKMI DECDLRIAEE 120
121 EKDLVQPMPP SLPSSSTTPL ATEADAPPVP IPAAPAKPMF RHEFYQKPEE AVVTIFAKKV 180
181 PKENVTVEFG EQILSVVIDV AGEEAYHLQP RLFGKIIPEK CRFEVLSTKV EIRLAKAEII 240
241 TWASLEYGKG QSVLPKPNVS SALSQRPVYP SSKPAKDWDK LEAEVKKQEK DEKLDGDAAM 300
301 NKFFSDIYSS ADEDMRRAMN KSFAESNGTV LSTNWKEVGT KKVESTPPDG MELKKWEY
|
| Detection Method: |  |
| Confidence: | 46.522879 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 2.40798956799643 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 2.35683872990179 | bayes_pls_golite062009 |
| binding | 2.14253214573541 | bayes_pls_golite062009 |
| protein binding | 1.65083457326273 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.907004002487622 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.820063686537832 | bayes_pls_golite062009 |
| ligase activity | 0.812268484883773 | bayes_pls_golite062009 |
