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View Structure Prediction Details

Protein: gi|79331243, gi|...
Organism: Arabidopsis thaliana
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|79331243, gi|....

Description E-value Query
Range
Subject
Range
gi|92895786 - gi|92895786|gb|ABE92847.1| Protein prenyltransferase, alpha subunit [Medicago truncatula]
455.0 [0..2] [344..4]

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Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGAPRVQSM NVAEAETRST LGSTAKKASP FITHKAVSKS LRKLERSSSG RTGSDEKTSY  60
   61 ATPTETVSSS SQKHTLNAAS ILRRHEQNLN SNLSLNASFS SDASMDSFHS RASTGRLIRS 120
  121 YSVGSRSKSY PSKPRSVVSE GALDSPPNGS E

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [152-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKKRCTWVTP NSDPCYIVFH DEEWGVPVHD DKRLFELLVL SGALAEHTWP TILSKRQAFR  60
   61 EVFADFDPNA IVKINEKKII GPGSPASTLL SDLKLRAVIE NARQILKVIE EYGSFDKYIW 120
  121 SFVKNKAIVS KFRYQRQVPA KTPKAEVISK DLVRRGFRSV GPTVVYSFMQ AAGITNDHLT 180
  181 SCFRFHHCIF EHERYV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.0
Match: 2ofiA
Description: No description for 2ofiA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle