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View Structure Prediction Details

Protein: gi|79331243, gi|...
Organism: Arabidopsis thaliana
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|79331243, gi|....

Description E-value Query
Range
Subject
Range
gi|92895786 - gi|92895786|gb|ABE92847.1| Protein prenyltransferase, alpha subunit [Medicago truncatula]
455.0 [0..2] [344..4]

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Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGAPRVQSM NVAEAETRST LGSTAKKASP FITHKAVSKS LRKLERSSSG RTGSDEKTSY  60
   61 ATPTETVSSS SQKHTLNAAS ILRRHEQNLN SNLSLNASFS SDASMDSFHS RASTGRLIRS 120
  121 YSVGSRSKSY PSKPRSVVSE GALDSPPNGS E

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [152-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKKRCTWVTP NSDPCYIVFH DEEWGVPVHD DKRLFELLVL SGALAEHTWP TILSKRQAFR  60
   61 EVFADFDPNA IVKINEKKII GPGSPASTLL SDLKLRAVIE NARQILKVIE EYGSFDKYIW 120
  121 SFVKNKAIVS KFRYQRQVPA KTPKAEVISK DLVRRGFRSV GPTVVYSFMQ AAGITNDHLT 180
  181 SCFRFHHCIF EHERYV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.0
Match: 2ofiA
Description: No description for 2ofiA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle