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View Structure Prediction Details

Protein: RHL1_ARATH
Organism: Arabidopsis thaliana
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RHL1_ARATH.

Description E-value Query
Range
Subject
Range
gi|3811320 - gi|3811320|gb|AAC69460.1| ROOT HAIRLESS 1 [Arabidopsis thaliana]
562.0 [0..1] [355..1]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRASSSKKG GSKGGDKDDA ESKQRKRLKT LALDNQLLSD SPAKSHSSLK PSKQVLKHHG  60
   61 TDIIRKSQRK NRFLFSFPGL LAPISAATIG DLDRLSTKNP VLYLNFPQGR MKLFGTILYP 120
  121 KNRYLTLQFS RGGKNVLCDD YFDNMIVFSE SWWIGTKEEN PEEARLDF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [169-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKELAQAENT EFDFQGGAGG AASVKKLASP EIGSQPTETD SPEVDNEDVL SEDGEFLDDK  60
   61 IQVTPPVQLT PPVQVTPVRQ SQRNSGKKFN FAETSSEASS GESEGNTSDE DEKPLLEPES 120
  121 STRSREESQD GNGITASASK LPEELPAKRE KLKSKDSKLV QATLSNLFKK AEEKTAGTSK 180
  181 AKSSSKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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