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View Structure Prediction Details

Protein: RHL1_ARATH
Organism: Arabidopsis thaliana
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RHL1_ARATH.

Description E-value Query
Range
Subject
Range
gi|3811320 - gi|3811320|gb|AAC69460.1| ROOT HAIRLESS 1 [Arabidopsis thaliana]
562.0 [0..1] [355..1]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRASSSKKG GSKGGDKDDA ESKQRKRLKT LALDNQLLSD SPAKSHSSLK PSKQVLKHHG  60
   61 TDIIRKSQRK NRFLFSFPGL LAPISAATIG DLDRLSTKNP VLYLNFPQGR MKLFGTILYP 120
  121 KNRYLTLQFS RGGKNVLCDD YFDNMIVFSE SWWIGTKEEN PEEARLDF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [169-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKELAQAENT EFDFQGGAGG AASVKKLASP EIGSQPTETD SPEVDNEDVL SEDGEFLDDK  60
   61 IQVTPPVQLT PPVQVTPVRQ SQRNSGKKFN FAETSSEASS GESEGNTSDE DEKPLLEPES 120
  121 STRSREESQD GNGITASASK LPEELPAKRE KLKSKDSKLV QATLSNLFKK AEEKTAGTSK 180
  181 AKSSSKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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