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View Structure Prediction Details

Protein: EDS1C_ARATH
Organism: Arabidopsis thaliana
Length: 623 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EDS1C_ARATH.

Description E-value Query
Range
Subject
Range
EDS1L_ARATH - Protein EDS1L OS=Arabidopsis thaliana GN=EDS1 PE=1 SV=1
852.0 [0..1] [623..1]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFEALTGIN GDLITRSWSA SKQAYLTERY HKEEAGAVVI FAFQPSFSEK DFFDPDNKSS  60
   61 FGEIKLNRVQ FPCMRKIGKG DVATVNEAFL KNLEAIIDPR TSFQASVEMA VRSRKQIVFT 120
  121 GHSSGGATAI LATVWYLEKY FIRNPNVYLE PRCVTFGAPL VGDSIFSHAL GREKWSRFFV 180
  181 NFVSRFDIVP RIMLARKASV EETLPHVLAQ LDPRKSSVQE SEQRITEFYT RVMRDTSTVA 240
  241 NQAVCELT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.69897
Match: 1uswA
Description: Crystal Structure of Ferulic Acid Esterase from Aspergillus niger
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [249-441]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSAEAFLETL SSFLELSPYR PAGTFVFSTE KRLVAVNNSD AILQMLFYTS QASDEQEWSL  60
   61 IPFRSIRDHH SYEELVQSMG KKLFNHLDGE NSIESTLNDL GVSTRGRQYV QAALEEEKKR 120
  121 VENQKKIIQV IEQERFLKKL AWIEDEYKPK CQAHKNGYYD SFKVSNEEND FKANVKRAEL 180
  181 AGVFDEVLGL MKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [442-529]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CQLPDEFEGD IDWIKLATRY RRLVEPLDIA NYHRHLKNED TGPYMKRGRP TRYIYAQRGY  60
   61 EHYILKPNGM IAEDVFWNKV NGLNLGLQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [530-623]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEEIQETLKN SGSECGSCFW AEVEELKGKP YEEVEVRVKT LEGMLGEWIT DGEVDDKEIF  60
   61 LEGSTFRKWW ITLPKNHKSH SPLRDYMMDE ITDT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle