| Protein: | PTR30_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 583 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR30_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
345.0 | [0..1] | [556..1] |
|
Region A: Residues: [1-474] |
1 11 21 31 41 51
| | | | | |
1 MEAAKVYTQD GTVDLQGRPV LASKTGRWRA CSFLLGYEAF ERMAFYGIAS NLVNYLTKRL 60
61 HEDTISSVRN VNNWSGAVWI TPIAGAYIAD SYIGRFWTFT ASSLIYVLGM ILLTMAVTVK 120
121 SLRPTCENGV CNKASSLQVT FFYISLYTIA IGAGGTKPNI STFGADQFDS YSIEEKKQKV 180
181 SFFNWWMFSS FLGALFATLG LVYIQENLGW GLGYGIPTVG LLVSLVVFYI GTPFYRHKVI 240
241 KTDNLAKDLV QVPIAAFKNR KLQCPDDHLE LYELDSHYYK SNGKHQVHHT PVFRFLDKAA 300
301 IKTSSRVPCT VTKVEVAKRV LGLIFIWLVT LIPSTLWAQV NTLFVKQGTT LDRKIGSNFQ 360
361 IPAASLGSFV TLSMLLSVPM YDQSFVPFMR KKTGNPRGIT LLQRLGVGFA IQIVAIAIAS 420
421 AVEVKRMRVI KEFHITSPTQ VVPMSIFWLL PQYSLLGIGD VFNAIGLLEF FYDQ
|
| Detection Method: |  |
| Confidence: | 7.39794 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.3426261924492 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.29689809004391 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.94035843948137 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.5181741634556 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| binding | 0.772207656683716 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [475-583] |
1 11 21 31 41 51
| | | | | |
1 SPEEMQSLGT TFFTSGIGLG NFLNSFLVTM IDKITSKGGG KSWIGNNLND SRLDYYYGFL 60
61 VVISIVNMGL FVWAASKYVY KSDDDTKEFS GGGCVQMEAK ALDTSPLSI
|
| Detection Method: | |
| Confidence: | 1.1 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
