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View Structure Prediction Details

Protein: KITHA_ARATH
Organism: Arabidopsis thaliana
Length: 238 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KITHA_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554005 - gi|21554005|gb|AAM63086.1| putative thymidine kinase [Arabidopsis thaliana]
327.0 [0..1] [238..1]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLKASFLI KTLDSDVTGD FLSDLERRGS GAVHVIMGPM FSGKSTSLLR RIKSEISDGR  60
   61 SVAMLKSSKD TRYAKDSVVT HDGIGFPCWA LPDLMSFPEK FGLDAYNKLD VIGIDEAQFF 120
  121 GDLYEFCCKV ADDDGKIVIV AGLDGDYLRR SFGAVLDIIP IADSVTKLTA RCEVCGHKAF 180
  181 FTLRKNCDTR TELIGGADVY MPVCRKHYIT NHIVIKASKK VLEDSDKARA ESCVAATI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.0
Match: 2orvA
Description: No description for 2orvA was found.

Predicted functions:

Term Confidence Notes
nucleobase, nucleoside, nucleotide kinase activity 3.66392587433723 bayes_pls_golite062009
nucleotide kinase activity 2.24094813695083 bayes_pls_golite062009
kinase activity 2.0779386406753 bayes_pls_golite062009
phosphotransferase activity, phosphate group as acceptor 1.96697952975573 bayes_pls_golite062009
binding 1.57531761895117 bayes_pls_golite062009
DNA binding 1.22619720972604 bayes_pls_golite062009
nucleic acid binding 1.17199530230795 bayes_pls_golite062009
transcription regulator activity 1.16376707327858 bayes_pls_golite062009
transcription factor activity 0.472763834470731 bayes_pls_golite062009
protein binding 0.456164256440374 bayes_pls_golite062009
adenylate kinase activity 0.447752711852745 bayes_pls_golite062009
hydrolase activity 0.420858111948277 bayes_pls_golite062009
catalytic activity 0.101795606736461 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle