| Protein: | BIM2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 311 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BIM2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
252.0 | [0..1] | [311..1] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MRTGKGNQEE EDYGEEDFNS KREGPSSNTT VHSNRDSKEN DKASAIRSKH SVTEQRRRSK 60
61 INERFQILRE LIPNSEQKRD TASFLLEVID YVQYLQEKVQ KYEGSYPGWS QEPTKLTPWR 120
121 NN
|
| Detection Method: |  |
| Confidence: | 14.045757 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.12507195426228 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
| DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
| transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
| transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |
|
Region A: Residues: [123-311] |
1 11 21 31 41 51
| | | | | |
1 HWRVQSLGNH PVAINNGSGP GIPFPGKFED NTVTSTPAII AEPQIPIESD KARAITGISI 60
61 ESQPELDDKG LPPLQPILPM VQGEQANECP ATSDGLGQSN DLVIEGGTIS ISSAYSHELL 120
121 SSLTQALQNA GIDLSQAKLS VQIDLGKRAN QGLTHEEPSS KNPLSYDTQG RDSSVEEESE 180
181 HSHKRMKTL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
