| Protein: | PUS6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 472 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUS6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
307.0 | [0..138] | [461..30] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MASPALTGGY RNLTAPVSLL RTLASTRVTT PLFRSNKHSP RFISSPKRFT CLSLLKTDSQ 60
61 NQTTLSSSSN SGYHEYNRLM PCPAYN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [87-472] |
1 11 21 31 41 51
| | | | | |
1 LPPRIEHMVV LEDDVLVSEF ISKQLDLPPL YVADLIRFGA VHYALVCPKP PPTATPEEII 60
61 LFEEVTSPSV LKKRSSIKGK TVREAQKTFR VTHTNQYAEA GTYLRVHVHP KRSPRCYEID 120
121 WKSRIVAVTD SYVILDKPAG TTVGGTTDNI EESCATFASR ALDLPEPLKT THQIDNCTEG 180
181 CVVFARTKEY CSVFHTKIRN KEVKKLYRAL AAAPLPIGII SHYMRPKNMA PRLVAEDSIQ 240
241 GWHLCQLEVL ECKKIPWPDA ATEKKHDIED CGWTSKEFAY ECTINLLTGK THQIRAQLAA 300
301 CGAPLVGDSM YMPAAIAEMG NPDTNPYGKA KKHYTMEENQ KETAVAEWID RHGKEPRVGI 360
361 GLQACQISWD DDDGEHFYEA GTPWWR
|
| Detection Method: | |
| Confidence: | 76.30103 |
| Match: | 1qyuA |
| Description: | Structure of the catalytic domain of 23S rRNA pseudouridine synthase RluD |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.49175104308599 | bayes_pls_golite062009 |
| isomerase activity | 0.87098451300632 | bayes_pls_golite062009 |
| intramolecular transferase activity | 0.86450504855635 | bayes_pls_golite062009 |
| pseudouridine synthase activity | 0.86297783328106 | bayes_pls_golite062009 |
