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View Structure Prediction Details

Protein: DIT21_ARATH
Organism: Arabidopsis thaliana
Length: 563 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIT21_ARATH.

Description E-value Query
Range
Subject
Range
gi|90304326, gi|... - gi|90304326|gb|EAS33957.1| hypothetical protein CIMG_04981 [Coccidioides immitis RS], gi|119189867|r...
299.0 [0..1] [554..490]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK  60
   61 PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI LSISVGLILR FAVPVP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGVTPQGWQL LSIFLSTIAG LVLSPLPVGA WAFIGLTASI VTKTLSFSAA FSAFTSEVIW  60
   61 LIVISFFFAR GFVKTGLGDR IATYFVKWLG KSTLGLSYGL TLSEALIAPA MPSTTARAGG 120
  121 IFLPIIKSLS LSAGSKPN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [255-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSSSRKLGSY LIQSQFQCAG NSSALFLTAA AQNLLCLKLA EELGVVISNP WVSWFKAASL  60
   61 PAIISLLCTP LILYKLYPPE TKDTPEAPGI AATKLKQMGP VTKNEWIMVG TMLLAVTLWI 120
  121 CGETLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [381-563]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPSVVAAMIG LSILLVLGVL NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC  60
   61 VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL 120
  121 ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL 180
  181 GLY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle