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View Structure Prediction Details

Protein: DIT21_ARATH
Organism: Arabidopsis thaliana
Length: 563 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIT21_ARATH.

Description E-value Query
Range
Subject
Range
gi|90304326, gi|... - gi|90304326|gb|EAS33957.1| hypothetical protein CIMG_04981 [Coccidioides immitis RS], gi|119189867|r...
299.0 [0..1] [554..490]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK  60
   61 PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI LSISVGLILR FAVPVP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGVTPQGWQL LSIFLSTIAG LVLSPLPVGA WAFIGLTASI VTKTLSFSAA FSAFTSEVIW  60
   61 LIVISFFFAR GFVKTGLGDR IATYFVKWLG KSTLGLSYGL TLSEALIAPA MPSTTARAGG 120
  121 IFLPIIKSLS LSAGSKPN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [255-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSSSRKLGSY LIQSQFQCAG NSSALFLTAA AQNLLCLKLA EELGVVISNP WVSWFKAASL  60
   61 PAIISLLCTP LILYKLYPPE TKDTPEAPGI AATKLKQMGP VTKNEWIMVG TMLLAVTLWI 120
  121 CGETLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [381-563]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPSVVAAMIG LSILLVLGVL NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC  60
   61 VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL 120
  121 ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL 180
  181 GLY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle