Protein: | P4KG4_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 566 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P4KG4_ARATH.
Description | E-value | Query Range |
Subject Range |
|
503.0 | [0..1] | [562..1] |
|
496.0 | [0..1] | [561..1] |
|
484.0 | [0..1] | [562..1] |
Region A: Residues: [1-106] |
1 11 21 31 41 51 | | | | | | 1 MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK 60 61 LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI LHLVLK |
Detection Method: | ![]() |
Confidence: | 27.69897 |
Match: | 2ojrA |
Description: | No description for 2ojrA was found. |
Region A: Residues: [107-423] |
1 11 21 31 41 51 | | | | | | 1 LSDLQVLDVK TTCGKHCRFH VERGRNIGYV KKQISKKRGD FVDPDEQEIL YEGEKLEDQS 60 61 LINDICRNDD SVLHLLVRRS AKVRVKPVEK NFELSIVAPQ AKDKKGREAK SIVPPKKLSL 120 121 EPVVVNSKAK VPLVVKDMIQ SASDGLKSGN SPVRSSEGTG GAYFMQGPSG NKFVGVFKPI 180 181 DEEPMAENNP QGLPLSPNGE GLKKGTKVGE GALREVAAYI LDHPKSGNKS MFGEEIGFAG 240 241 VPPTAMIECL HPGFNHPKGI KTKIGSLQMF TENDGSCEDM GPLSFPVEEV HKISVLDIRL 300 301 ANADRHGGNI LMTKDES |
Detection Method: | ![]() |
Confidence: | 3.25 |
Match: | 1oqyA |
Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [424-566] |
1 11 21 31 41 51 | | | | | | 1 GKLVLVPIDH GYCLPESFED CTFEWLYWPQ ARKPYSAETQ EYIRSLDAEE DIDLLKFHGW 60 61 KMPAETAQTL RISTMLLKKG VERGLTAFEI GTIMCRETLS KKSLVEEMVE EAQEAVLPGT 120 121 SEAAFLEALS DVMDYHLDHS QEH |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.698 | a.208.1 | Description not found. |
View | Download | 0.677 | f.1.1 | Colicin |
View | Download | 0.677 | f.1.1 | Colicin |
View | Download | 0.595 | a.96.1 | DNA-glycosylase |
View | Download | 0.595 | a.96.1 | DNA-glycosylase |
View | Download | 0.558 | a.1.1 | Globin-like |
View | Download | 0.558 | a.1.1 | Globin-like |
View | Download | 0.530 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
View | Download | 0.410 | a.118.16 | Testis/brain RNA-binding protein (TB-RBP) |