| Protein: | RK1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 346 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RK1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
408.0 | [0..1] | [346..1] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MAACATHSSL MLAYAAASTR SQDLTPTPSL FSFASSRPNH LSFPLLLLGG SRDRRCAAID 60
61 RASNHKFIVS AVAAEADLDT EEDLEQTATA VLDPPKPKKG K
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.708 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.681 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.640 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.626 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.602 | N/A | N/A | d.15.1 | Ubiquitin-like |
|
Region A: Residues: [102-346] |
1 11 21 31 41 51
| | | | | |
1 AALVLKRDRT RSKRFLEIQK LRETKKEYDV NTAISLLKQT ANTRFVESVE AHFRLNIDPK 60
61 YNDQQLRATV SLPKGTGQTV IVAVLAQGEK VDEAKSAGAD IVGSDDLIEQ IKGGFMEFDK 120
121 LIASPDMMVK VAGLGKILGP RGLMPNPKAG TVTANIPQAI EEFKKGKVEF RADKTGIVHI 180
181 PFGKVNFTEE DLLINFLAAV KSVETNKPKG AKGVYWKSAH ICSSMGPSIK LNIREMIDFK 240
241 PPTAN
|
| Detection Method: | |
| Confidence: | 75.30103 |
| Match: | 1giyC |
| Description: | 70S ribosome functional complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 9.98821526471491 | bayes_pls_golite062009 |
| structural molecule activity | 9.4110731269774 | bayes_pls_golite062009 |
| binding | 1.37133122073906 | bayes_pls_golite062009 |
| protein binding | 0.335149649581279 | bayes_pls_golite062009 |
