| Protein: | FAO3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 746 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FAO3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
405.0 | [0..16] | [744..28] |
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MDKYKVAGKF GLPDITVAEM ESLASFCEAV LPSVQPPPEE LSGEGDNHRN KEALRSFYST 60
61 SGSKTPVLRQ SIELVTKRGT IEAYIATRLI LFLLATRLGT LLICGTECLV SRWPFVEKFS 120
121 ELSLEKRERV LQKQFKNWIL TPIRAAFVYI KVAFLFCFFS RVN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [164-228] |
1 11 21 31 41 51
| | | | | |
1 PNGENPAWEA IGYRVNPDEN KPSETHNERP LEKGIVETME ETEQTLLESL AHKGLEAVLD 60
61 TEHDA
|
| Detection Method: | |
| Confidence: | 10.221849 |
| Match: | 1h7xA |
| Description: | Dihydropyrimidine dehydrogenase, N-terminal domain; Dihydropyrimidine dehydrogenase, domain 4; Dihydropyrimidine dehydrogenase, domain 3; Dihydropyrimidine dehydrogenase, domain 2; Dihydropyrimidine dehydrogenase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [229-746] |
1 11 21 31 41 51
| | | | | |
1 IRIKCDVVVV GSGSGGGVAA SVLAKSGLKV VVLEKGSYFT PSEHRPFEGP GLDKLYENGG 60
61 ILPSVDGSFM VLAGATVGGG SAVNWSACIK TPKSVLQEWS EDQNIPLFGT KEYLTAMEVV 120
121 WKRMGVTEKC ELESFQNQIL RKGCENLGFN VENVPRNSSE SHYCGSCGYG CRQGDKKGSD 180
181 RTWLVDAVGH GAVILTGCKA ERFILEKNGS NKGGKQMKCL GVMAKSLNGN IAKMLKIEAK 240
241 VTVSAGGALL TPPLMISSGL RNRNIGKNLH LHPVLMAWGY FPDKESSNIS FKGNSYEGGI 300
301 ITSVSKVLSE DSEVRAIIET PQLGPGSFSV LTPWTSGLDM KKRMARYSRT ASLITIVRDR 360
361 GSGEVKTEGR INYTVDKTDR DNLKAGLRES LRILIAAGAE EVGTHRSDGQ RLICKGVNEN 420
421 SIQEFLDSVS TEEGAKGMTE KWNVYSSAHQ MGSCRIGENE KEGAIDLNGE SWEAEKLFVC 480
481 DASALPSAVG VNPMITVMST AYCISTRIAK SMTTGLSH
|
| Detection Method: | |
| Confidence: | 59.39794 |
| Match: | 1cf3A |
| Description: | Glucose oxidase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.40171956669527 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.383635162195694 | bayes_pls_golite062009 |
