| Protein: | gi|11357516, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 535 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11357516, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
345.0 | [0..1] | [535..1] |
|
|
292.0 | [0..91] | [531..7] |
|
|
290.0 | [0..78] | [530..2] |
|
|
288.0 | [0..11] | [535..9] |
|
|
286.0 | [0..78] | [530..2] |
|
|
282.0 | [0..96] | [530..14] |
|
|
282.0 | [0..99] | [531..15] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MFSKYSFILC LIFFFVTAFS GDSRALAGNN EQKNISGFSG IDFPNPMRFG SASSSTSNDC 60
61 GFSSPEKEPT KERTGENKTV KFHLKRRETT T
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.217 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.201 | a.54.1 | Domain of early E2A DNA-binding protein, ADDBP |
|
Region A: Residues: [92-535] |
1 11 21 31 41 51
| | | | | |
1 TEKATTNSVL ELQIRDLTRI QTLHKRVLEK NNQNTVSQKQ KKNDKEVVTT TPVASSVEEQ 60
61 AGQLVATLES GMTLGSGEYF MDVLVGSPPK HFSLILDTGS DLNWIQCLPC YDCFQQNGAF 120
121 YDPKASASYK NITCNDQRCN LVSSPDPPMP CKSDNQSCPY YYWYGDSSNT TGDFAVETFT 180
181 VNLTTNGGSS ELYNVENMMF GCGHWNRGLF HGAAGLLGLG RGPLSFSSQL QSLYGHSFSY 240
241 CLVDRNSDTN VSSKLIFGED KDLLSHPNLN FTSFVAGKEN LVDTFYYVQI KSILVAGEVL 300
301 NIPEETWNIS SDGAGGTIID SGTTLSYFAE PAYEFIKNKI AEKAKGKYPV YRDFPILDPC 360
361 FNVSGIHNVQ LPELGIAFAD GAVWNFPTEN SFIWLNEDLV CLAMLGTPKS AFSIIGNYQQ 420
421 QNFHILYDTK RSRLGYAPTK CADI
|
| Detection Method: | |
| Confidence: | 66.522879 |
| Match: | 2psgA |
| Description: | REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
