| Protein: | RBOHD_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 921 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RBOHD_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
791.0 | [0..1] | [921..1] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP 60
61 KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG GHLEDPELAL LTKKTLESSL 120
121 NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRF
|
| Detection Method: |  |
| Confidence: | 5.0 |
| Match: | 2cn5A |
| Description: | No description for 2cn5A was found. |
|
Region A: Residues: [159-340] |
1 11 21 31 41 51
| | | | | |
1 DRTSSAAIHA LKGLKFIATK TAAWPAVDQR FDKLSADSNG LLLSAKFWEC LGMNKESKDF 60
61 ADQLFRALAR RNNVSGDAIT KEQLRIFWEQ ISDESFDAKL QVFFDMVDKD EDGRVTEEEV 120
121 AEIISLSASA NKLSNIQKQA KEYAALIMEE LDPDNAGFIM IENLEMLLLQ APNQSVRMGD 180
181 SR
|
| Detection Method: | |
| Confidence: | 42.69897 |
| Match: | 2f2oA |
| Description: | Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [341-489] |
1 11 21 31 41 51
| | | | | |
1 ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN 60
61 KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK 120
121 VIASGIVVGV LLHAGAHLTC DFPRLIAAD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [490-921] |
1 11 21 31 41 51
| | | | | |
1 EDTYEPMEKY FGDQPTSYWW FVKGVEGWTG IVMVVLMAIA FTLATPWFRR NKLNLPNFLK 60
61 KLTGFNAFWY THHLFIIVYA LLIVHGIKLY LTKIWYQKTT WMYLAVPILL YASERLLRAF 120
121 RSSIKPVKMI KVAVYPGNVL SLHMTKPQGF KYKSGQFMLV NCRAVSPFEW HPFSITSAPG 180
181 DDYLSVHIRT LGDWTRKLRT VFSEVCKPPT AGKSGLLRAD GGDGNLPFPK VLIDGPYGAP 240
241 AQDYKKYDVV LLVGLGIGAT PMISILKDII NNMKGPDRDS DIENNNSNNN SKGFKTRKAY 300
301 FYWVTREQGS FEWFKGIMDE ISELDEEGII ELHNYCTSVY EEGDARVALI AMLQSLQHAK 360
361 NGVDVVSGTR VKSHFAKPNW RQVYKKIAVQ HPGKRIGVFY CGMPGMIKEL KNLALDFSRK 420
421 TTTKFDFHKE NF
|
| Detection Method: | |
| Confidence: | 50.69897 |
| Match: | 1cqxA |
| Description: | Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxidoreductase activity | 3.63104057348215 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH | 3.51215695612257 | bayes_pls_golite062009 |
| NADH dehydrogenase (ubiquinone) activity | 3.16088106136981 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor | 3.111558299994 | bayes_pls_golite062009 |
| oxygen binding | 3.00647431286466 | bayes_pls_golite062009 |
| riboflavin synthase activity | 2.93302227890511 | bayes_pls_golite062009 |
| transporter activity | 2.82854186201092 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.74894673967321 | bayes_pls_golite062009 |
| NADH dehydrogenase activity | 2.39225626523677 | bayes_pls_golite062009 |
| NADH dehydrogenase (quinone) activity | 2.34041929019601 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor | 2.2317814267351 | bayes_pls_golite062009 |
| FAD binding | 2.07600122867642 | bayes_pls_golite062009 |
| oxygen transporter activity | 1.78021144232114 | bayes_pls_golite062009 |
| coenzyme binding | 1.66552102285114 | bayes_pls_golite062009 |
| molecular transducer activity | 1.59457655213395 | bayes_pls_golite062009 |
| signal transducer activity | 1.59457655213395 | bayes_pls_golite062009 |
| cytochrome-b5 reductase activity | 1.5685421124725 | bayes_pls_golite062009 |
| cofactor binding | 1.53717310937468 | bayes_pls_golite062009 |
| catalytic activity | 1.45374095556065 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH, with oxygen as acceptor | 1.39469367242077 | bayes_pls_golite062009 |
| binding | 1.33256635332573 | bayes_pls_golite062009 |
| protein binding | 1.29518074303313 | bayes_pls_golite062009 |
| NADP or NADPH binding | 1.18833847639357 | bayes_pls_golite062009 |
| receptor activity | 0.977817619616883 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on sulfur group of donors | 0.90349352746963 | bayes_pls_golite062009 |
| FMN binding | 0.649158247260553 | bayes_pls_golite062009 |
| antioxidant activity | 0.46048982927229 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on peroxide as acceptor | 0.431171115433616 | bayes_pls_golite062009 |
| peroxidase activity | 0.431171115433616 | bayes_pls_golite062009 |
| NAD(P)H oxidase activity | 0.270721094503631 | bayes_pls_golite062009 |
| transferase activity | 0.00498326987177106 | bayes_pls_golite062009 |
