| Protein: | gi|10176871, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 985 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10176871, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
697.0 | [0..1] | [985..1] |
|
|
686.0 | [0..4] | [985..2] |
|
|
679.0 | [0..1] | [985..1] |
|
|
669.0 | [0..3] | [985..2] |
|
|
655.0 | [0..3] | [984..2] |
|
|
577.0 | [0..6] | [981..273] |
|
|
570.0 | [0..9] | [981..17] |
|
Region A: Residues: [1-166] |
1 11 21 31 41 51
| | | | | |
1 MATGAATENQ WLKGRVKAVT SGDCLVITAL THNRAGPPPE KTITLSSLMA PKMARRGGID 60
61 EPFAWESREF LRKLCIGKEV AFKVDYKVEA IAGREFGSVY LGNENLAKLV VQNGWAKVRR 120
121 PGQQNQDKVS PYIAELEQLE EQAQQEGFGR WSKVPGAAEA SIRNLP
|
| Detection Method: |  |
| Confidence: | 26.522879 |
| Match: | 1staA |
| Description: | ACCOMMODATION OF INSERTION MUTATIONS ON THE SURFACE AND IN THE INTERIOR OF STAPHYLOCOCCAL NUCLEASE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [167-380] |
1 11 21 31 41 51
| | | | | |
1 PSAVGDSGNF DAMGLLAASK GKPMEGIVEQ VRDGSTIRVY LLPEFQFVQV FVAGLQAPSM 60
61 GRRQSTQEAV VDPDVTATSN GDASAETRGP LTTAQRLAAS AASSVEVSSD PFAMEAKYFT 120
121 ELRVLNRDVR IVLEGVDKFN NLIGSVYYSD GDTVKDLGLE LVENGLAKYV EWSANMLDEE 180
181 AKKKLKATEL QCKKNRVKMW ANYVPPASNS KAIH
|
| Detection Method: | |
| Confidence: | 6.721246 |
| Match: | PF00565.9 |
| Description: | No description for PF00565.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [381-985] |
1 11 21 31 41 51
| | | | | |
1 DQNFTGKVVE VVSGDCLVVA DDSIPFGSPM AERRVCLSSI RSPKMGNPRR EEKPAPYARE 60
61 AKEFLRQKLI GMEVIVQMEY SRKISPGDGV TTSGAGDRVM DFGSVFLPSP TKGDTAVAAA 120
121 ATPGANIAEL IISRGLGTVV RHRDFEERSN HYDALLAAEA RAIAGKKNIH SAKDSPALHI 180
181 ADLTVASAKK AKDFLPSLQR INQISAVVEY VLSGHRFKLY IPKESCSIAF AFSGVRCPGR 240
241 GEPYSEEAIA LMRRKIMQRD VEIVVENVDR TGTFLGSMWE KNSKTNAGTY LLEAGLAKMQ 300
301 TGFGADRIPE AHILEMAERS AKNQKLKIWE NYVEGEEVVN GSSKVETRQK ETLKVVVTEV 360
361 LGGGRFYVQT VGDQKVASIQ NQLAALSLKD APIIGSFNPK KGDIVLAQFS LDNSWNRAMI 420
421 VNGPRGAVQS PEEEFEVFYI DYGNQEIVPY SAIRPVDPSV SSAPGLAQLC RLAYIKVPGK 480
481 EEDFGRDAGE YLHTVTLESG KEFRAVVEER DTSGGKVKGQ GTGTELVVTL IAVDDEISVN 540
541 AAMLQEGIAR MEKRRRWEPK DKQAALDALE KFQDEARKSR TGIWEYGDIQ SDDEDNVPVR 600
601 KPGRG
|
| Detection Method: | |
| Confidence: | 100.0 |
| Match: | 3bdlA |
| Description: | No description for 3bdlA was found. |
