| Protein: | FIMB5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 687 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FIMB5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
503.0 | [0..1] | [670..1] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MSSYVGVLVS DPWLQSQFTQ VELRTLKSKF VSNKTQLGRF TVGDLPPVFE KLKAFNGTID 60
61 EDEIKSVLDK SYPNADDEVD FEFFLRAFLS VQARGVEKSG GSKGASSFLK TSTTTV
|
| Detection Method: |  |
| Confidence: | 22.69897 |
| Match: | 2f2oA |
| Description: | Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [117-623] |
1 11 21 31 41 51
| | | | | |
1 HHAINESEKA SYVSHVNNYL RDDPFLKSYL PIDPATNAFF DLVKDGVLLC KLINVAVPGT 60
61 IDERAINTKK TLNPWERNEN LTLGLNSAKA IGCTVVNIGT QDIAEGRPYL VLGLISQIIK 120
121 IQMLADLNFK KTPSLFQLVD DTQDAEELMG LAPEKVLLKW MNFHLKKAGY EKQVTNFSSD 180
181 LKDGEAYAYL LNALAPEHST HVALETKDPT ERAKKVLEQA EKLDCKRYLS PKDIVDGSAN 240
241 LNLAFVAQIF QHRNGLTVDD SKTSFAEMMT DDVETSREER CFRLWINSLG TATYVNNVFE 300
301 DLRNGWVLLE VLDKVSPGSV NWKHANKPPI KMPFKKVENC NEVIKIGKEL RFSLVNVAGN 360
361 DIVQGNKKLL LAFLWQLMRY TMLQLLRNLR SHSQGKEITD ADILNWANRK VKRGGRTSQA 420
421 DSFRDKNLSS GMFFLELLSA VEPRVVNWSL VTNGETEEDK KLNATYIISV ARKLGCSIFL 480
481 LPEDIIEVNQ KMMLILAASI MYWSLQQ
|
| Detection Method: | |
| Confidence: | 116.0 |
| Match: | 1pxyA |
| Description: | Crystal structure of the actin-crosslinking core of Arabidopsis fimbrin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 7.50245214720686 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 6.48140000563569 | bayes_pls_golite062009 |
| actin filament binding | 5.47084878097979 | bayes_pls_golite062009 |
| tubulin binding | 4.22039137964246 | bayes_pls_golite062009 |
| microtubule binding | 4.15537672860167 | bayes_pls_golite062009 |
| binding | 2.8655705697659 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 2.57886434162184 | bayes_pls_golite062009 |
| protein binding | 2.36488136094907 | bayes_pls_golite062009 |
| microtubule plus-end binding | 2.0465241878708 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.32485442580942 | bayes_pls_golite062009 |
| structural molecule activity | 1.00964022808548 | bayes_pls_golite062009 |
|
Region A: Residues: [624-687] |
1 11 21 31 41 51
| | | | | |
1 QSDTESTVSE DATDDGDANS VAGEISNLSI DGASESSPTV QDQELLTKAD NDEDEVDGEN 60
61 NKDA
|
| Detection Method: | |
| Confidence: | 68.69897 |
| Match: | 1sjjA |
| Description: | Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin |
Matching Structure (courtesy of the PDB): |
|
