| Protein: | UBP5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 924 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
648.0 | [0..21] | [919..87] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MAEVSMGSSS SSTDLSPEEE RVFIRDIAIA AEANSKEGDT FYLITQRWWQ EWIEYVNQDQ 60
61 PCNTNDGSSL SEHCDSPGSS TLKKPSRIDN SDLIYDSS
|
| Detection Method: |  |
| Confidence: | 30.154902 |
| Match: | 1w6vA |
| Description: | Solution structure of the DUSP domain of hUSP15 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.67898130941709 | bayes_pls_golite062009 |
| protein binding | 0.732160783930613 | bayes_pls_golite062009 |
|
Region A: Residues: [99-245] |
1 11 21 31 41 51
| | | | | |
1 LEDPSNTSEI IETLQEGRDY VLLPQEVWNQ LRSWYGGGPT LARRVISSGL SQTELAVEVY 60
61 PLRLQLLLMP KSDHSAIRIS KKETIRELHR RACEIFDLDS EHVRIWDYYG HQKYSLMNDL 120
121 DKTLDDANLQ MDQDILVEVL DINGTLS
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 2i50A |
| Description: | No description for 2i50A was found. |
|
Region A: Residues: [246-452] |
1 11 21 31 41 51
| | | | | |
1 SAHIQSAQEN GLVDGDSTSI LIEPSKSSLA AAGGFSSSRN AFRTGSVEVS QSFDNTYSST 60
61 GVTTRGSTAG LTGLLNLGNT CFMNSAIQCL VHTPEFASYF QEDYHQEINW QNPLGMVGEL 120
121 ALAFGDLLRK LWAPGRTPIA PRPFKAKLAR FAPQFSGYNQ HDSQELLAFL LDGLHEDLNR 180
181 VKHKPYINSR DADGRPDEEV ADEFWKN
|
| Detection Method: | |
| Confidence: | 65.69897 |
| Match: | 2gfoA |
| Description: | No description for 2gfoA was found. |
|
Region A: Residues: [453-924] |
1 11 21 31 41 51
| | | | | |
1 HIARNDSIIV DVCQGQYKST LVCPICNKVS VTFDPFMYLS LPLQFNTTRA ITVTVFSCDK 60
61 TALPSTITVN VSKQGRCRDL IQALTNACSL KQSEELKLAE IRNNFIHRLF EDPLIPLSSI 120
121 KDDDHLAAYK LSKSSENTTL LRLVLRRRDQ KAGERESTVQ LKPCGTPLLS SASCGDALTK 180
181 GKIHCLVQNM LSPFRREESV GKKGNSDSSI PERRSARFNN TEEEDKVGGL KKAKKSNSSD 240
241 LGASKLSLQL IDEDNKTINL PDNEAEAMKL PSSATVTIYL DWTPELSGMY DITCLESLPE 300
301 VLKYGPTTKK ARSEPLSLYA CLEAFLREEP LVPDEMWFCP QCNERRQASK KLDLWRLPEV 360
361 LVIHLKRFSY SRSMKHKLET FVNFPIHDLD LTKYVANKNL SQPQLYELYA LTNHYGGMGS 420
421 GHYTAHIKLL DDSRWYNFDD SHISHINEDD VKSGAAYVLF YRRKSDAGGK MT
|
| Detection Method: | |
| Confidence: | 47.39794 |
| Match: | 2f1zA |
| Description: | Crystal structure of HAUSP |
Matching Structure (courtesy of the PDB): |
|
