YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: HNL_ARATH
Organism: Arabidopsis thaliana
Length: 258 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HNL_ARATH.

Description E-value Query
Range
Subject
Range
tr|Q889S4|Q889S4... - Arylesterase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_0675 PE=4 SV=1
gi|28867903, gi|... - gi|28867903|ref|NP_790522.1| arylesterase [Pseudomonas syringae pv. tomato str. DC3000], gi|28851139...
167.0 [0..4] [255..20]

Back

Predicted Domain #1
Region A:
Residues: [1-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERKHHFVLV HNAYHGAWIW YKLKPLLESA GHRVTAVELA ASGIDPRPIQ AVETVDEYSK  60
   61 PLIETLKSLP ENEEVILVGF SFGGINIALA ADIFPAKIKV LVFLNAFLPD TTHVPSHVLD 120
  121 KYMEMPGGLG DCEFSSHETR NGTMSLLKMG PKFMKARLYQ NCPIEDYELA KMLHRQGSFF 180
  181 TEDLSKKEKF SEEGYGSVQR VYVMSSEDKA IPCDFIRWMI DNFNVSKVYE IDGGDHMVML 240
  241 SKPQKLFDSL SAIATDYM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.30103
Match: 1y7hA
Description: Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.76673721118052 bayes_pls_golite062009
carboxylesterase activity 0.73967567655491 bayes_pls_golite062009
lipase activity 0.51002916472898 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.0940814269146387 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle