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View Structure Prediction Details

Protein: ILVD_ARATH
Organism: Arabidopsis thaliana
Length: 608 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ILVD_ARATH.

Description E-value Query
Range
Subject
Range
gi|14532594 - gi|14532594|gb|AAK64025.1| putative dihydroxyacid dehydratase [Arabidopsis thaliana]
879.0 [0..1] [608..1]

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Predicted Domain #1
Region A:
Residues: [1-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQATIFSPRA TLFPCKPLLP SHNVNSRRPS IISCSAQSVT ADPSPPITDT NKLNKYSSRI  60
   61 TEPKSQGGSQ AILHGVGLSD DDLLKPQIGI SSVWYEGNTC NMHLLKLSEA VKEGVENAGM 120
  121 VGFRFNTIGV SDAISMGTRG MCFSLQSRDL IADSIETVMS AQWYDGNISI PGCDKNMPGT 180
  181 IMAMGRLNRP GIMVYGGTIK PGHFQDKTYD IVSAFQSYGE FVSGSISDEQ RKTVLHHSCP 240
  241 GAGACGGMYT ANTMASAIEA MGMSLPYSSS IPAEDPLKLD ECRLAGKYLL ELLKMDLKPR 300
  301 DIITPKSLRN AMVSVMALGG STNAVLHLIA IARSVGLELT LDDFQKVSDA VPFLADLKPS 360
  361 GKYVMEDIHK IGGTPAVLRY LLELGLMDGD CMTVTGQTLA QNLENVPSLT EGQEIIRPLS 420
  421 NPIKETGHIQ ILRGDLAPDG SVAKITGKEG LYFSGPALVF EGEESMLAAI SADPMSFKGT 480
  481 VVVIRGEGPK GGPGMPEMLT PTSAIMGAGL GKECALLTDG RFSGGSHGFV VGHICPEAQE 540
  541 GGPIGLIKNG DIITIDIGKK RIDTQVSPEE MNDRRKKWTA PAYKVNRGVL YKYIKNVQSA 600
  601 SDGCVTDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 176.0
Match: 2gp4A
Description: No description for 2gp4A was found.

Predicted functions:

Term Confidence Notes
3-isopropylmalate dehydratase activity 5.35660492472618 bayes_pls_golite062009
catalytic activity 1.61959327305722 bayes_pls_golite062009
carbon-oxygen lyase activity 1.16841092671386 bayes_pls_golite062009
hydro-lyase activity 1.13002130445077 bayes_pls_golite062009
lyase activity 1.11228159918123 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle