YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ACR3_ARATH
Organism: Arabidopsis thaliana
Length: 453 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACR3_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593552 - gi|21593552|gb|AAM65519.1| unknown [Arabidopsis thaliana]
340.0 [0..1] [453..1]
gi|92890833 - gi|92890833|gb|ABE90521.1| ACT domain, putative [Medicago truncatula]
294.0 [0..10] [452..2]
gi|28875985, gi|... - gi|34896992|ref|NP_909842.1| putative ACT domain repeat protein [Oryza sativa (japonica cultivar-gro...
288.0 [0..1] [449..3]

Back

Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVYWPYFD PEYENLSSRI NPPSVSIDNT SCKECTLVKV DSMNKPGILL EVVQVLTDLD  60
   61 LTITKAYISS DGGWFMDVFH VTDQQGNKVT DSKTIDYIEK VLGPKGHASA SQNTWPGKRV 120
  121 GVHSLGDHTS IEIIARDRPG LLSEVSAVLA DLNINVVAAE AWTHN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 2nyiA
Description: No description for 2nyiA was found.

Predicted Domain #2
Region A:
Residues: [166-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRIACVLYVN DNATSRAVDD PERLSSMEEQ LNNVLRGCEE QDEKFARTSL SIGSTHVDRR  60
   61 LHQMFFADRD YEAVTKLDDS ASCGFEPKIT VEHCEE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [262-453]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGYSVINVSC EDRPKLMFDI VCTLTDMQYI VFHATISSSG SHASQEYFIR HKDGCTLDTE  60
   61 GEKERVVKCL EAAIHRRVSE GWSLELCAKD RVGLLSEVTR ILREHGLSVS RAGVTTVGEQ 120
  121 AVNVFYVKDA SGNPVDVKTI EALRGEIGHS MMIDFKNKVP SRKWKEEGQA GTGGGWAKTS 180
  181 FFFGNLLEKL LP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.522879
Match: 1u8sA
Description: Crystal structure of putative glycine cleavage system transcriptional repressor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle