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View Structure Prediction Details

Protein: ACR3_ARATH
Organism: Arabidopsis thaliana
Length: 453 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACR3_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593552 - gi|21593552|gb|AAM65519.1| unknown [Arabidopsis thaliana]
340.0 [0..1] [453..1]
gi|92890833 - gi|92890833|gb|ABE90521.1| ACT domain, putative [Medicago truncatula]
294.0 [0..10] [452..2]
gi|28875985, gi|... - gi|34896992|ref|NP_909842.1| putative ACT domain repeat protein [Oryza sativa (japonica cultivar-gro...
288.0 [0..1] [449..3]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVYWPYFD PEYENLSSRI NPPSVSIDNT SCKECTLVKV DSMNKPGILL EVVQVLTDLD  60
   61 LTITKAYISS DGGWFMDVFH VTDQQGNKVT DSKTIDYIEK VLGPKGHASA SQNTWPGKRV 120
  121 GVHSLGDHTS IEIIARDRPG LLSEVSAVLA DLNINVVAAE AWTHN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 2nyiA
Description: No description for 2nyiA was found.

Predicted Domain #2
Region A:
Residues: [166-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRIACVLYVN DNATSRAVDD PERLSSMEEQ LNNVLRGCEE QDEKFARTSL SIGSTHVDRR  60
   61 LHQMFFADRD YEAVTKLDDS ASCGFEPKIT VEHCEE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.651 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.651 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.644 c.131.1 Description not found.
View Download 0.640 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.640 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.638 c.47.1 Thioredoxin-like
View Download 0.613 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.613 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.488 c.51.1 Anticodon-binding domain of Class II aaRS

Predicted Domain #3
Region A:
Residues: [262-453]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGYSVINVSC EDRPKLMFDI VCTLTDMQYI VFHATISSSG SHASQEYFIR HKDGCTLDTE  60
   61 GEKERVVKCL EAAIHRRVSE GWSLELCAKD RVGLLSEVTR ILREHGLSVS RAGVTTVGEQ 120
  121 AVNVFYVKDA SGNPVDVKTI EALRGEIGHS MMIDFKNKVP SRKWKEEGQA GTGGGWAKTS 180
  181 FFFGNLLEKL LP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.522879
Match: 1u8sA
Description: Crystal structure of putative glycine cleavage system transcriptional repressor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle