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View Structure Prediction Details

Protein: gi|15230305, gi|...
Organism: Arabidopsis thaliana
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15230305, gi|....

Description E-value Query
Range
Subject
Range
gi|51969948 - gi|51969948|dbj|BAD43666.1| putative LEA protein [Arabidopsis thaliana]
271.0 [0..1] [408..1]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVAFATSS PPLISSVRTL RRHFSVFAAA NPEMSRPSHH SSLEVIGGGS DRFLPSLKDS  60
   61 LAKPYNAFPL IGFNRHVETI YASFFRSVPF V

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLRRECLRTK DNGSVALDWV AGEDRHFPPD SPILILLPGL TGGSQDSYVR HMLLRAQSKK  60
   61 WRCVVFNSRG CGDSPVTTPQ FYSASFLGDI GEVIDHVVDK FPKANLYAAG WSLGGNILVN 120
  121 YLGQESHNCP LTAAVSLCNP FDLVIADEDF HKGFNNVYDK ALSKSLRRIF SKHSLLFEDI 180
  181 GGEFNIPLAA NAETVRDFDD GLTRVSFGFK SVDEYYSKSS SSKAIKHVRI PLLCIQAAND 240
  241 PIAPERGIPR DDIKANPNCV LIVTPRGGHL GWVAGEEAPN GAPWTDQVVM EFLQHVENRE 300
  301 TINGERSFED VHDQIQV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.30103
Match: 1a8sA
Description: CHLOROPEROXIDASE F/PROPIONATE COMPLEX
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 1.6481148920688 bayes_pls_golite062009
binding 0.978846093152455 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.642552200351214 bayes_pls_golite062009
carboxylesterase activity 0.0264147222103929 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle