| Protein: | PUM24_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 641 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUM24_ARATH.
| Description | E-value | Query Range |
Subject Range |
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390.0 | [0..99] | [442..704] |
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389.0 | [0..99] | [441..694] |
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388.0 | [0..99] | [441..706] |
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388.0 | [0..99] | [441..629] |
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388.0 | [0..99] | [441..519] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MSSKGLKPQK STKRKDTDSS AKFDSLKSKK PKLVSGEQQQ HVKPKFGKPK SAGDKEQSTN 60
61 LSKKERRVQA KELTEARKKK RKPHYNLEQE LVSLWEKMRR RNI
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.445 | a.130.1 | Chorismate mutase II |
| View | Download | 0.386 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.386 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.383 | a.130.1 | Chorismate mutase II |
| View | Download | 0.383 | a.130.1 | Chorismate mutase II |
| View | Download | 0.348 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.348 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.329 | d.20.1 | UBC-like |
| View | Download | 0.301 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.276 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.225 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.203 | a.36.1 | Signal peptide-binding domain |
|
Region A: Residues: [104-442] |
1 11 21 31 41 51
| | | | | |
1 GKEDRSKLIS EAIRKMKGKV PEIAVSHVSS RVLQTCVKFC SQAEKDVLFT ELQPQFLNLA 60
61 SNKYAVHFIQ KMLDGASKQQ LAACISSLRG HVAPLLRHVF GSLVVEHAYH LGSAAQKQEL 120
121 LAELYSTELQ LFKGLTTSNE KTVVDIIAKL GLQKGAVNRH MTAIIQPILE KGIVDHTITH 180
181 KLLIEYLTIA DKTSAADVLQ LLTGSLLLRM VHTRDGSRLA MLSIKHGSAK ERKKIIKAMK 240
241 EHVKKMAFDQ FGSMVLACIF SIVDDTKLVT KIIVRELEAT LKDLVMDKNG RRPLLQLLHP 300
301 NSSRYLSHDD LAALDLSVPS LCSMDKSETS SKTKDTDGN
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| Detection Method: | |
| Confidence: | 90.522879 |
| Match: | 1ib2A |
| Description: | Pumilio 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [443-641] |
1 11 21 31 41 51
| | | | | |
1 EIGEETKDEQ EDTVAEHSDH EENVTAMGGK KDPLVRRQEL LVNSGLAERL IDVCVENAEE 60
61 FLQSKFGNEV MYEVAIGGSD GILCPSLSEK LCELYEAISS VAAEPKPQES EKDSEHILEN 120
121 FHSSRTIRRL VLNRPGFASI LFKKALSGKC RSWAQGHCSK ILSAFVETED VQVREMAKTE 180
181 LQVLVNEGTL KISATKKPE
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| Detection Method: | |
| Confidence: | 1.05 |
| Match: | 1ib2A |
| Description: | Pumilio 1 |
| Matching Structure (courtesy of the PDB): |
|
