| Protein: | Y1301_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 634 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1301_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
565.0 | [0..14] | [594..3] |
|
|
559.0 | [0..14] | [594..3] |
|
|
549.0 | [0..14] | [628..3] |
|
|
537.0 | [0..30] | [597..65] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MGLVTVGELK PAFTGKRGFR LNSTIRHASE WPISDVSSDL TVQVGSSSFC LHKFPLVSRS 60
61 GKIRKLLADP KISNVCLSNA PGGSEAFELA AKFCYGINIE INLLNIAKLR CASHYLEMTE 120
121 DFSE
|
| Detection Method: |  |
| Confidence: | 20.522879 |
| Match: | 1r28A |
| Description: | Crystal Structure of the B-Cell Lymphoma 6 (BCL6) BTB domain to 2.2 Angstrom |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [125-229] |
1 11 21 31 41 51
| | | | | |
1 ENLASKTEHF LKETIFPSIL NSIIVLHHCE TLIPVSEDLN LVNRLIIAVA NNACKEQLTS 60
61 GLLKLDYSFS GTNIEPQTPL DWWGKSLAVL NLDFFQRVIS AVKSK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [230-354] |
1 11 21 31 41 51
| | | | | |
1 GLIQDVISKI LISYTNKSLQ GLIVRDPKLE KERVLDSEGK KKQRLIVETI VRLLPTQGRR 60
61 SSVPMAFLSS LLKMVIATSS SASTGSCRSD LERRIGLQLD QAILEDVLIP INLNGTNNTM 120
121 YDIDS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [355-454] |
1 11 21 31 41 51
| | | | | |
1 ILRIFSIFLN LDEDDEEEEH HHLQFRDETE MIYDFDSPGS PKQSSILKVS KLMDNYLAEI 60
61 AMDPNLTTSK FIALAELLPD HARIISDGLY RAVDIYLKVH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.858 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.800 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.779 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.725 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.597 | a.246.2 | Description not found. |
| View | Download | 0.579 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.231 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.229 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.222 | a.200.1 | Description not found. |
| View | Download | 0.205 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
|
Region A: Residues: [455-541] |
1 11 21 31 41 51
| | | | | |
1 PNIKDSERYR LCKTIDSQKL SQEACSHAAQ NERLPVQMAV QVLYFEQIRL RNAMSSSIGP 60
61 TQFLFNSNCH QFPQRSGSGA GSGAISP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.769 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.722 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.707 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.698 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.688 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.668 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.668 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.640 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.639 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.639 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.598 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.590 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.546 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [542-634] |
1 11 21 31 41 51
| | | | | |
1 RDNYASVRRE NRELKLEVAR MRMRLTDLEK DHISIKQELV KSNPGTKLFK SFAKKISKLN 60
61 SLFSFSSLKP SLSGKASSES RFLFQRKRRH SVS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.511 | d.110.8 | Description not found. |
| View | Download | 0.443 | b.55.1 | PH domain-like |
| View | Download | 0.332 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.285 | d.15.11 | Doublecortin (DC) |
| View | Download | 0.285 | d.15.11 | Doublecortin (DC) |
| View | Download | 0.229 | a.77.1 | DEATH domain |
| View | Download | 0.229 | a.77.1 | DEATH domain |
| View | Download | 0.210 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
