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View Structure Prediction Details

Protein: SKIP1_ARATH
Organism: Arabidopsis thaliana
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SKIP1_ARATH.

Description E-value Query
Range
Subject
Range
FBpp0300846 - type=protein; loc=3R:join(22363345..22363506,22370765..22370882,22380079..22380661,22380955..2238137...
160.0 [0..2] [298..19]

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Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEDGSDWGG LAPEILINII SRLTIQELWT GPMFVQKSWL TVCRDPYLWS IFDLEPWFDS  60
   61 YPESTHLWSP EFEQKVDLML RSVVDWSEGG LTKIRVRHCS DHALSYAADR CPNLQVLAIR 120
  121 SSPNVTDASM TKIAFRCRSL KELDISYCHE ISHDTLVMIG RNCPNLRILK RNLMDWSSRH 180
  181 IGSVPTEYLD ACPQDGDTEA DAIGKHMINL EHLEIQFSRL SVKGLASICE GCPKLEYLDL 240
  241 FGCVHLSSRD ITSNVSRLKW LKEVKKPDVY VPRSGDVAQT ERYGHWRLYD ERFDIQAMRI 300
  301 

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Detection Method: PSI-BLAST
Confidence: 15.30103
Match: 1fqvA
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle