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View Structure Prediction Details

Protein: gi|25369340, gi|...
Organism: Arabidopsis thaliana
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25369340, gi|....

Description E-value Query
Range
Subject
Range
gi|15230893, gi|... - gi|225194907|gb|ACN81954.1| C-terminal domain phosphatase-like 5 [Arabidopsis thaliana], gi|15230893...
272.0 [0..1] [282..295]

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Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLIENSCLE PESKTATLIC GHFFVRYGIC CNCRSTVDRD YGRAFDYLVH GLQLSHKAVA  60
   61 VTKSLTTQLA CLNERKLHLV LDLDHTLLHS IMISRLSEGE KYLLGESDFR EDLWTLDREM 120
  121 LIKLRPFVHE FLKEANEIFS MYVYTMGNRD YAQAVLKWID PKKVYFGDRV ITRDESGFSK 180
  181 TLDLVLADEC GVVIVDDTRH VWPDHERNLL QITKYSYFRD YSHDKESKSY AEEKRDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.154902
Match: 2hhlA
Description: No description for 2hhlA was found.

Predicted Domain #2
Region A:
Residues: [238-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRNQGSLANV LKVLKDVHQE FFRGGIEELD SKDVRLLLQE QHIAVSIKIC SQNLSHQKQM  60
   61 SPFISGSNKH ENVKFYKSQS MELDTITGTG SRVYSSSEEH CLVCT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle