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View Structure Prediction Details

Protein: UXS5_ARATH
Organism: Arabidopsis thaliana
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UXS5_ARATH.

Description E-value Query
Range
Subject
Range
gi|60932273 - gi|60932273|gb|AAX37336.1| UDP-glucuronic acid decarboxylase 3 [Populus tomentosa]
326.0 [0..2] [340..3]

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Predicted Domain #1
Region A:
Residues: [1-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSDKQTSP KPPPSPSPLR NSKFCQSNMR ILISGGAGFI GSHLVDKLME NEKNEVIVAD  60
   61 NYFTGSKDNL KKWIGHPRFE LIRHDVTEPL LIEVDQIYHL ACPASPIFYK YNPVKTIKTN 120
  121 VIGTLNMLGL AKRVGARILL TSTSEVYGDP LIHPQPESYW GNVNPIGVRS CYDEGKRVAE 180
  181 TLMFDYHRQH GIEIRIARIF NTYGPRMNID DGRVVSNFIA QALRGEALTV QKPGTQTRSF 240
  241 CYVSDMVDGL MRLMEGDDTG PINIGNPGEF TMVELAETVK ELINPSIEIK MVENTPDDPR 300
  301 QRKPDITKAK EVLGWEPKVK LREGLPLMEE DFRLRLGVHK N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.30103
Match: 2b69A
Description: Crystal Structure of Human UDP-glucoronic acid decarboxylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
UDP-glucose 4-epimerase activity 2.13934644118967 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 1.03956654822048 bayes_pls_golite062009
nucleic acid binding 0.868888700854563 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.82673050487418 bayes_pls_golite062009
DNA binding 0.790382977752475 bayes_pls_golite062009
binding 0.784517759335365 bayes_pls_golite062009
transcription regulator activity 0.613310508772122 bayes_pls_golite062009
transcription factor activity 0.11102650759187 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle