| Protein: | gi|39545894, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 286 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39545894, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
302.0 | [0..2] | [283..125] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MALKEQLDKF NKQQVKCQST LSSIASSRER TSSSRQNVPL PAAITQKKPD AAPVKFSSDT 60
61 ERLQNINNIR KAPVGAQIKR VIDLLYERRL ALTPEQINEW CHVDMHANKA VFDSLRKNPK 120
121 AHYDG
|
| Detection Method: |  |
| Confidence: | 19.522879 |
| Match: | 1d8jA |
| Description: | The central core domain of TFIIE beta |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [126-286] |
1 11 21 31 41 51
| | | | | |
1 RRFSYKATHD VNDKNQLLSL VRKYLDGIAV VDLKDAYPNV MEDLKALSAS GDIYLLSNSQ 60
61 EDIAYPNDFK CEIKVDDEFK ALFRDINIPN DMLDVEKELL KIGLKPATNT AERRAAAQTH 120
121 GISNKPKDKK KKKQEISKRT KLTNAHLPEL FQNLNGSSSR N
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
