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View Structure Prediction Details

Protein: CDPK7_ARATH
Organism: Arabidopsis thaliana
Length: 535 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDPK7_ARATH.

Description E-value Query
Range
Subject
Range
CDPKW_ARATH - Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1
418.0 [0..1] [535..1]

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Predicted Domain #1
Region A:
Residues: [1-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNCCGNPSS ATNQSKQGKP KNKNNPFYSN EYATTDRSGA GFKLSVLKDP TGHDISLQYD  60
   61 LGREVGRGEF GITYLCTDKE TGEKYACKSI SKKKLRTAVD IEDVRREVEI MKHMPKHPNV 120
  121 VSLKDSFEDD DAVHIVMELC EGGELFDRIV ARGHYTERAA AAVMKTIVEV VQICHKQGVM 180
  181 HRDLKPENFL FANKKETSAL KAIDFGLSVF FKPGEQFNEI VGSPYYMAPE VLRRNYGPEI 240
  241 DVWSAGVILY ILLCGVPPFW AETEQGVAQA IIRSVIDFKR DPWPRVSDSA KDLVRKMLEP 300
  301 DPKKRLTAAQ VLEHTWILNA KKAPNVSLGE TVKARLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.69897
Match: 2jc6A
Description: No description for 2jc6A was found.

Predicted Domain #2
Region A:
Residues: [338-462]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QFSVMNKLKK RALRVIAEHL SVEEAAGIKE AFEMMDVNKR GKINLEELKY GLQKAGQQIA  60
   61 DTDLQILMEA TDVDGDGTLN YSEFVAVSVH LKKMANDEHL HKAFNFFDQN QSGYIEIDEL 120
  121 REALN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.522879
Match: 2aaoA
Description: Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [463-535]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DELDNTSSEE VIAAIMQDVD TDKDGRISYE EFVAMMKAGT DWRKASRQYS RERFNSLSLK  60
   61 LMRDGSLQLE GET

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.21
Match: 2be4A
Description: X-RAY STRUCTURE AN EF-HAND PROTEIN FROM DANIO RERIO Dr.36843
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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