YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ATL69_ARATH
Organism: Arabidopsis thaliana
Length: 159 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL69_ARATH.

Description E-value Query
Range
Subject
Range
gi|47497675, gi|... - gi|50900320|ref|XP_450948.1| RING-H2 zinc finger protein ATL6-like [Oryza sativa (japonica cultivar-...
121.0 [0..4] [155..34]

Back

Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPISPPASG VGLGYGIAIA VSILVLISFI MLASYICIRS KSTGRDEATS DVVLDLPSPA  60
   61 AEVKLGLDRP VIESYPRIVL GDSRRLPRPN NGPCSICLCD YEAREPVRCI PECNHCFHTD 120
  121 CVDEWLRTSA TCPLCRNSPA PSRLATPLSD LVPLAFQIR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.045757
Match: 1x4jA
Description: Solution structure of RING finger in RING finger protein 38
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle