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View Structure Prediction Details

Protein: PHT16_ARATH
Organism: Arabidopsis thaliana
Length: 516 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHT16_ARATH.

Description E-value Query
Range
Subject
Range
gi|49527412 - gi|49527412|emb|CAG61052.1| unnamed protein product [Candida glabrata]
gi|50291337, gi|... - gi|50291337|ref|XP_448101.1| unnamed protein product [Candida glabrata], gi|49527412|emb|CAG61052.1|...
316.0 [0..1] [507..97]

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Predicted Domain #1
Region A:
Residues: [1-516]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANEEQGSIL KALDVAKTQW YHVTAVVVSG MGFFTDSYDL FVISLITKLL GRIYYQVPGS  60
   61 SSPGSLPDGI SAAVSGVAFA GTFIGQIFFG CLGDKLGRKR VYGLTLLIMT ICSICSGLSL 120
  121 GRDPKTVMVT LCFFRFWLGF GIGGDYPLSA TIMSEYSNKR TRGAFIAAVF GMQGIGILAA 180
  181 GAVSLLVSAV FESKFPSRAY ILDGAASTVP QADYVWRIIL MVGALPALLT YYWRMKMPET 240
  241 ARYTALVSKN AEQAALDMTK VLNVDIEASA AKNDQARVSS DEFGLFSMKF LRRHGLHLLG 300
  301 TASTWFLLDI AFYSQNLFQK DIFTTIGWLP SAKTMNAIQE LYMIAKAQTI IACCSTVPGY 360
  361 FFTVGFIDYM GRKKIQIMGF AMMTIFMLSL AIPYHHWTLP ANRIGFVVLY SFTFFFSNFG 420
  421 PNATTFIVPA EIFPARIRST CHGISAASGK AGAMVGSFGF SALVKALGMS NTLYIMAGIN 480
  481 LLGLLLTFTI PETNGKSLEE LSGETEPEKI KEKIVV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.30103
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
alcohol transmembrane transporter activity 6.7545566917184 bayes_pls_golite062009
polyol transmembrane transporter activity 6.7545566917184 bayes_pls_golite062009
glycerol transmembrane transporter activity 6.54968363274124 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 5.46247398538901 bayes_pls_golite062009
glycerol-3-phosphate transmembrane transporter activity 5.40344495119017 bayes_pls_golite062009
ion transmembrane transporter activity 4.58978526526921 bayes_pls_golite062009
cation transmembrane transporter activity 4.31967711223954 bayes_pls_golite062009
transporter activity 4.09176719149278 bayes_pls_golite062009
anion transmembrane transporter activity 3.94605227012838 bayes_pls_golite062009
substrate-specific transporter activity 3.59744164024479 bayes_pls_golite062009
transmembrane transporter activity 3.5865018981083 bayes_pls_golite062009
organic anion transmembrane transporter activity 3.3413526350788 bayes_pls_golite062009
hexose phosphate transmembrane transporter activity 3.06277334881374 bayes_pls_golite062009
glucose-6-phosphate transmembrane transporter activity 3.06277334881374 bayes_pls_golite062009
sugar:hydrogen symporter activity 2.99050613058546 bayes_pls_golite062009
cation:sugar symporter activity 2.99050613058546 bayes_pls_golite062009
monosaccharide transmembrane transporter activity 2.63293544825311 bayes_pls_golite062009
carbohydrate transmembrane transporter activity 2.62141276633776 bayes_pls_golite062009
inorganic anion transmembrane transporter activity 2.52916479889426 bayes_pls_golite062009
sugar transmembrane transporter activity 2.47557586092261 bayes_pls_golite062009
solute:hydrogen symporter activity 2.10485633822652 bayes_pls_golite062009
phosphate transmembrane transporter activity 1.78662033436109 bayes_pls_golite062009
active transmembrane transporter activity 1.59419818573076 bayes_pls_golite062009
binding 1.3181781780038 bayes_pls_golite062009
secondary active transmembrane transporter activity 1.22264637452409 bayes_pls_golite062009
symporter activity 0.74591237387473 bayes_pls_golite062009
solute:cation symporter activity 0.74591237387473 bayes_pls_golite062009

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