| Protein: | ATL49_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 423 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL49_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
204.0 | [0..1] | [421..1] |
|
Region A: Residues: [1-114] |
1 11 21 31 41 51
| | | | | |
1 MNKILPEMKS TQNLISSSPP PPLIPLKSNT SLSNLNSKIT PNILLIIIIL SIIFFISGLL 60
61 HILVKFLLTP SRESREDYFD NVTALQGQLQ QLFNLHDSGV DQSLIDTLPV FHYK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [115-177] |
1 11 21 31 41 51
| | | | | |
1 SIVGLKISPF DCPVCLCEFE TEDKLRLLPK CSHAFHVECI DTWLLSHSTC PLCRSNLLSG 60
61 FSS
|
| Detection Method: | |
| Confidence: | 15.30103 |
| Match: | 1iymA |
| Description: | EL5 RING-H2 domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [178-423] |
1 11 21 31 41 51
| | | | | |
1 HHNLSSSYLL VLESEQSSRD MVPVLESNSQ LGYDVNNDSE STRIRSGRKS CDPDGDMDGL 60
61 DEKVVPLEVK LGKFRNIDHV GEGSDQKKNS ISGNSKNVDG RRCLSMGSYE YIMDQEATLK 120
121 VHVSTKKLSG KDRVPSHRTV MSECGFDPTV KGIEKSVVER ESFSLSKIWL RGKKEKQKGT 180
181 SARDSDCSFV SSSSLRFPNH RIPPEESLKS ENSESLETKT PSFARRTMHW LAGRQNKIVQ 240
241 PSTSNV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
