| Protein: | SMC6A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1058 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for SMC6A_ARATH.
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MDEHGDHRQS NPFNDQQTSS GKILRIRLEN FMCHSNLEIE FGDWVNFITG QNGSGKSAIL 60
61 TALCVAFGCR ARGTQRAATL KDFIKTGCSY ALVYVELKNQ GEDAFKPEIY GDTLIIERRI 120
121 SDSTSLTVLK DHQG
|
| Detection Method: |  |
| Confidence: | 35.522879 |
| Match: | 1xewX |
| Description: | Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [135-433] |
1 11 21 31 41 51
| | | | | |
1 RKISSRKEEL RELVEHYNID VENPCVIMSQ DKSREFLHSG NDKDKFKFFY KATLLQQVDD 60
61 ILQSIGTKLN SANALLDEME KTIKPIEKEI NELLEKIKNM EHVEEITQQV LHLKKKLAWS 120
121 WVYDVDRQLK EQNEKIVKFK ERVPTCQNKI DRKLGEVESL RVSLTEKKAQ VACLIDESTA 180
181 MKRELECLRQ SMKKAAREKI ALEEEYHHKC SNIQKIKDRV RRLERQIEDI NEMTIRSTQV 240
241 EQSEIEGKLN QLTVEVEKAE SLVSSLKEEE NMVMEKASAG GKEKEHIEEM IRDHEKKQR
|
| Detection Method: | |
| Confidence: | 19.09691 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [434-528] |
1 11 21 31 41 51
| | | | | |
1 NMNAHINDLK KHQTNKVTAF GGDKVINLLR AIERHHRRFK MPPIGPIGAH VTLINGNRWA 60
61 SAVEQALGNL LNAFIVTDHK DLVALRDCGK EAKYN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [529-885] |
1 11 21 31 41 51
| | | | | |
1 NLKIIIYDFS RPRLDIPRHM IPQTEHPTIL SVLHSENTTV LNVLVDVSCV ERHVLAENYE 60
61 VGKIIAFERR LSHLKDVFTI DGYRMFSRGP VQTTLPPRPR RPTRLCASFD DQIKDLEIEA 120
121 SREQSEIQEC RGQKREAEMN LEGLESTMRR LKKQRTQLEK DLTRKELEMQ DLKNSVASET 180
181 KASPTSSVNE LHLEIMKFQK EIEEKESLLE KLQDSLKEAE LKANELKASY ENLYESAKGE 240
241 IEALEKAEDE LKEKEDELHS AETEKNHYED IMKDKVLPEI KQAETIYKEL EMKRQESNKK 300
301 ASIICPESEI KALGPWDGPT PLQLSAQINK INHRLKRENE NYSESIDDLR IMHGEKE
|
| Detection Method: | |
| Confidence: | 10.09691 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [886-1058] |
1 11 21 31 41 51
| | | | | |
1 QKIGKKRKTY KSCREKLKVC KDAVDSRWNK LQRNKDLLKR ELTWQFNHHL GKKGISGNIR 60
61 VSYEDKTLSI EVKMPQDATN SAVRDTRGLS GGERSFSTLC FTLALQNMTE APIRAMDEFD 120
121 VFMDAVSRKI SLDTLIDFAL KQGSQWMFIT PHDISMVKSH EKIKKQQMAA PRS
|
| Detection Method: | |
| Confidence: | 22.30103 |
| Match: | 1w1wA |
| Description: | Sc Smc1hd:Scc1-C complex, ATPgS |
Matching Structure (courtesy of the PDB): |
|
