| Protein: | C3H54_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 245 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C3H54_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
253.0 | [0..1] | [245..1] |
|
|
248.0 | [0..1] | [245..1] |
|
|
241.0 | [0..1] | [245..1] |
|
|
238.0 | [0..1] | [245..1] |
|
|
227.0 | [0..1] | [245..1] |
|
|
225.0 | [0..1] | [245..1] |
|
|
222.0 | [0..1] | [245..1] |
|
|
147.0 | [0..31] | [232..240] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MLKSASPMAF YDIGEQQYST FGYILSKPGN AGAYEIDPSI PNIDDAIYGS DEFRMYAYKI 60
61 KRCPRTRSHD WTECPYAHRG EKATRRDPRR YTYCAVACPA FRNGACHRGD SCEFAHGVFE 120
121 YWLHPARYRT RA
|
| Detection Method: |  |
| Confidence: | 2.63 |
| Match: | 2cqeA |
| Description: | Solution Structure of the Zinc-finger domain in KIAA1064 protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [133-155] |
1 11 21 31 41 51
| | | | | |
1 CNAGNLCQRK VCFFAHAPEQ LRQ
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | 2d9nA |
| Description: | No description for 2d9nA was found. |
|
Region A: Residues: [156-245] |
1 11 21 31 41 51
| | | | | |
1 SEGKHRCRYA YRPVRARGGG NGDGVTMRMD DEGYDTSRSP VRSGKDDLDS NEEKVLLKCW 60
61 SRMSIVDDHY EPSDLDLDLS HFDWISELVD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.700 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.556 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.556 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.473 | d.42.1 | POZ domain |
| View | Download | 0.419 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.355 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.355 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.354 | a.3.1 | Cytochrome c |
| View | Download | 0.351 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.322 | a.4.1 | Homeodomain-like |
| View | Download | 0.244 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.201 | d.52.8 | Description not found. |
