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View Structure Prediction Details

Protein: gi|5734786, gi|2...
Organism: Arabidopsis thaliana
Length: 710 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5734786, gi|2....

Description E-value Query
Range
Subject
Range
gi|54291559, gi|... - gi|54291559|dbj|BAD62483.1| putative oligopeptidase B [Oryza sativa Japonica Group], gi|54291358|dbj...
488.0 [0..1] [710..39]

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Predicted Domain #1
Region A:
Residues: [1-710]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESRSPPVA KKVEHVMEMF GDVRVDNYYW LRDDSRTNPD MLSYLREENH YTDFVMSGTK  60
   61 QFENQLFAEI RGRIKEDDIS APLRKGPYYY YEKNLQGKEY IQHCRRLITD NKAEPSVYDT 120
  121 MPTGPDAPPE HVILDENTKA QEHDYYRIGA FKASPDHKLV AYAEDTKGDE IYTVNVIDSE 180
  181 ALKPVGQQLK GLTSYLEWAG NDALLYITMD EILRPDKVWL HKLGTEQSSD VCLYHEKDDM 240
  241 FSLELHASES HKYLFVASES KTTRFVFSLD VSKTQDGLRV LTPRVDGIDS SVSHRGNHFF 300
  301 IQRRSTEFYN SELIACPVDD TSKTTVLLPH RESVKIQEIQ LFRDHLAVFE RENGLQKITV 360
  361 HRLPAEGQPL EGLQGGRNVS FVDPVYSVDS TESEFSSRVL RFKYCSMKTP PSVYDYDMDS 420
  421 GTSVVKKIDT VLGGFDASNY VTERKWVAAS DGTQIPMSIV YNKKLAKLDG SDPLLLYGYG 480
  481 SYEISVDPYF KASRLSLLDR GFTFVIAHVR GGGEMGRQWY ENGKLLKKKN TFTDFIACAE 540
  541 RLIELKYCSK EKLCMEGRSA GGLLMGAVVN MRPDLFKVVI AGVPFVDVLT TMLDPTIPLT 600
  601 TSEWEEWGDP RKEEFYFYMK SYSPVDNVTA QNYPNMLVTA GLNDPRVMYS EPGKWVAKLR 660
  661 EMKTDNNVLL FKCELGAGHF SKSGRFEKLQ EDAFTFAFMM KVLDMIPASG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 1e5tA
Description: Prolyl oligopeptidase, N-terminal domain; Prolyl oligopeptidase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.65329406211558 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
peptidase activity 0.961519510535888 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.667074468681133 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.560001331598537 bayes_pls_golite062009
binding 0.284995999425341 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle