| Protein: | SCR_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 653 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCR_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
503.0 | [0..1] | [653..1] |
|
|
466.0 | [0..149] | [650..76] |
|
|
452.0 | [0..149] | [650..69] |
|
Region A: Residues: [1-193] |
1 11 21 31 41 51
| | | | | |
1 MAESGDFNGG QPPPHSPLRT TSSGSSSSNN RGPPPPPPPP LVMVRKRLAS EMSSNPDYNN 60
61 SSRPPRRVSH LLDSNYNTVT PQQPPSLTAA ATVSSQPNPP LSVCGFSGLP VFPSDRGGRN 120
121 VMMSVQPMDQ DSSSSSASPT VWVDAIIRDL IHSSTSVSIP QLIQNVRDII FPCNPNLGAL 180
181 LEYRLRSLML LDP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [194-304] |
1 11 21 31 41 51
| | | | | |
1 SSSSDPSPQT FEPLYQISNN PSPPQQQQQH QQQQQQHKPP PPPIQQQERE NSSTDAPPQP 60
61 ETVTATVPAV QTNTAEALRE RKEEIKRQKQ DEEGLHLLTL LLQCAEAVSA D
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.533 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.511 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.511 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.422 | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.413 | a.1.1 | Globin-like |
| View | Download | 0.398 | a.7.8 | GAT domain |
| View | Download | 0.398 | a.7.8 | GAT domain |
| View | Download | 0.397 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.397 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.394 | a.47.2 | t-snare proteins |
|
Region A: Residues: [305-653] |
1 11 21 31 41 51
| | | | | |
1 NLEEANKLLL EISQLSTPYG TSAQRVAAYF SEAMSARLLN SCLGIYAALP SRWMPQTHSL 60
61 KMVSAFQVFN GISPLVKFSH FTANQAIQEA FEKEDSVHII DLDIMQGLQW PGLFHILASR 120
121 PGGPPHVRLT GLGTSMEALQ ATGKRLSDFA DKLGLPFEFC PLAEKVGNLD TERLNVRKRE 180
181 AVAVHWLQHS LYDVTGSDAH TLWLLQRLAP KVVTVVEQDL SHAGSFLGRF VEAIHYYSAL 240
241 FDSLGASYGE ESEERHVVEQ QLLSKEIRNV LAVGGPSRSG EVKFESWREK MQQCGFKGIS 300
301 LAGNAATQAT LLLGMFPSDG YTLVDDNGTL KLGWKDLSLL TASAWTPRS
|
| Detection Method: | |
| Confidence: | 0.962 |
| Match: | 1im8A |
| Description: | Hypothetical protein HI0319 (YecO) |
Matching Structure (courtesy of the PDB): |
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