| Protein: | gi|25411745, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 1109 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25411745, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
609.0 | [0..1] | [1064..1] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MASSSSSRTW NYRVFASFHG PDVRKSFLSH FRKQFICNGI TMFDDQKIVR SQTIAPSLTQ 60
61 GIRESKISIV ILSKNYASST WCLNELLEIL KCREDIGQIV MTVFYGVDPS DVRKQTGEFG 120
121 TVFNKTCARR TEKERRNWSQ ALNVVGNIAG EHFLNWDNEA EMIEKIARDV SEK
|
| Detection Method: |  |
| Confidence: | 4.53 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.166909062418251 | bayes_pls_golite062009 |
|
Region A: Residues: [174-342] |
1 11 21 31 41 51
| | | | | |
1 LNMTPSSDFD GMVGIEAHLK EMEVLLDFDY DGVKIVGIFG PAGIGKTTIA RALHSLLLFK 60
61 KFQLTCFVDN LRGSYPIGID EYGLKLRLQE HLLSKILNQD GMRISHLGAV KERLCDMKVL 120
121 IILDDVNDVK QLEALANDTT WFGPGSRVIV TTENKEILQR HGIDNMYHV
|
| Detection Method: | |
| Confidence: | 10.0 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [343-866] |
1 11 21 31 41 51
| | | | | |
1 GFPSDEKAME ILCGYAFKQS SPRPGFNYLA QKVTWLCGNL PLGLRVVGSS LRGKKEDEWK 60
61 SVIRRLDTII DRDIEDVLRV GYESLHENEQ SLFLHIAVFF NCKDVDLVKA MLADDNLDIA 120
121 HGLKILVNKS LIYISTTGEI RMHKLLQQVG RQAINRQEPW KRLILTNAQE ICYVLENDKG 180
181 TGVVSGISFD TSGISEVILS NRALRRMSNL RFLSVYKTRH DGNNIMHIPE DMKFPPRLRL 240
241 LHWEAYPSKS LPLGFCLENL VELNMKDSQL EKLWEGTQLL TNLKKMDLSR SVHLKELPDL 300
301 SNATNLERLE LCDCRALVEL PKSIGNLHKL ENLVMANCIS LEVIPTHINL ASLEHITMTG 360
361 CSRLKTFPDF STNIERLLLI GTSVEEVPAS IRHWSSLSDF CIKNNEDLKS LTYFPEKVEL 420
421 LDLSYTDIEK IPDCIKGFHG LKSLDVAGCR KLTSLPELPM SLGLLVALDC ESLEIITYPL 480
481 NTPSARLNFT NCFKLGEESR RLIIQRCATQ FLDGYACLPG RVMP
|
| Detection Method: | |
| Confidence: | 22.154902 |
| Match: | 2z63A |
| Description: | No description for 2z63A was found. |
|
Region A: Residues: [867-948] |
1 11 21 31 41 51
| | | | | |
1 DEFNQRTSGN NSLNIRLSSA SFKFKACVVI SPNQQQHSWE HTDIRCIVGS YNKVICVEHP 60
61 NESTRIQTEH LCIFHGSVSE VS
|
| Detection Method: | |
| Confidence: | 16.30103 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [949-1109] |
1 11 21 31 41 51
| | | | | |
1 SNEALFEFCI DASNQFDNFK ILECGVRILT NEPERSSKKT VSRGLRSHAK ILKACLHKRK 60
61 QKKMIGYLLK EEFGLPRDNR IIEVDEDNNN DHTVSLDSAS DNVEGKEKPI DCWSWLCICF 120
121 DLSNIVRNMG KLVLGKETTE SIDGGVLHEY STRKDDDVTM G
|
| Detection Method: | |
| Confidence: | 29.09691 |
| Match: | 2omtA |
| Description: | No description for 2omtA was found. |
