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View Structure Prediction Details

Protein: gi|9758541, gi|1...
Organism: Arabidopsis thaliana
Length: 792 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9758541, gi|1....

Description E-value Query
Range
Subject
Range
gi|116184553, gi... - gi|75855209|ref|ZP_00762867.1| COG1770: Protease II [Vibrio sp. Ex25], gi|116184553|ref|ZP_01474487....
457.0 [0..5] [791..1]

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Predicted Domain #1
Region A:
Residues: [1-792]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSNLSRTFS RHNCRFRRQQ CRCYKPPKSP PPPPPPPALP KPPKKPQSFT FHDATWEDPY  60
   61 SWMSKLEDKV AMRHMDIYME QEEKYTEAVL ADTDRIQTKL QSEMASRLSF ELSTPPLRWG 120
  121 PWLYYRRVEE GKQYPVLCRR LASLHEEFIS HKSPAAGFDY TSGKRIEQKL LDYNQEAERF 180
  181 GGYAYEEMSE ISPDHKFLAY TMYDKDNDYF KLCVRNLNSG ALCSKPHADR VSNIAWAKNG 240
  241 QALLYVVTDQ KKRPCRIYCS TIGSTDEDVL LHEEFEGNVH VNIRHTKDFH FVTVNTFSTT 300
  301 FSKVFLINAA DPFSGLALVW EHNAPAHCII EHHQGFLYLF TNASNDGGTV DHHYLLRSPV 360
  361 HFSSCQRIWE TVFINDPELI IEDVDFCKKH LSLIVKEMQS FKICVVDLPL KTKRVPVHLR 420
  421 DIKPRYLPLP KHVSQIFPGT NYDFNSPTMR FTISSLVMPD AVVDYDLLNG KWNIVQQQNM 480
  481 LHERTRVLYG TANSTESPNI PSGTRTVSFD TEDTTAENDN LWNDLTEFYA CDYHEVSSHD 540
  541 GAMVPLSIVY SRAQKEENQK PGLLHVHGAY GEMLDKRWRS ELKSLLDRGW VLAYADVRGG 600
  601 GGKGKKWHQD GRGAKKLNSI KDYIQCAKYL VENNIVEENK LAGWGYSAGG LVVASAINHC 660
  661 PDLFQAAVLK VPFLDPTHTL IYPILPLTAE DYEEFGYPGD INDFHAIREY SPYDNIPKDV 720
  721 LYPAVLVTSS FNTRFGVWEA AKWVARVRDN TFNDPERPVL LNLTTDIVEE NRFLQTKESA 780
  781 LEIAFLIKMM ES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 1h2wA
Description: Prolyl oligopeptidase, N-terminal domain; Prolyl oligopeptidase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.48013881015789 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
peptidase activity 1.12223067833053 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.84896705840223 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.100880080935406 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle