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View Structure Prediction Details

Protein: gi|15222875, gi|...
Organism: Arabidopsis thaliana
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222875, gi|....

Description E-value Query
Range
Subject
Range
gi|8778995, gi|2... - gi|8778995|gb|AAF79910.1|AC022472_19 Contains similarity to SCUTL1 mRNA from Vitis vinifera gb|AF195...
399.0 [0..19] [330..16]
OS13_SOLCO - Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1
329.0 [0..2] [263..1]
gi|53830831 - gi|53830831|gb|AAU95237.1| osmotin-like protein [Solanum phureja]
PGSC0003DMP400005467 - PGSC0003DMT400007870
329.0 [0..2] [263..1]
gi|1167854 - gi|1167854|emb|CAA64620.1| PR protein; osmotin [Nicotiana tabacum]
326.0 [0..5] [263..4]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPLPLIFL IFSHLFVSGV RSTSFIMVNK CEYTVWPGLL SNAGVPPLPT TGFVLQKGEE  60
   61 RTISAPTSWG GRFWGRTQCS TDTDGKFTCL TGDCGSGTLE CSGSGATPPA TLAEFTLDGS 120
  121 NGLDFYDVSL VDGYNVPMLV APQGGSGLNC SSTGCVVDLN GSCPSELKVT SLDGRGKQSM 180
  181 GCKSACEAFR TPEYCCSGAH GTPDTCKPSS YSLMFKTACP RAYSYAYDDQ SSTFTCAESP 240
  241 NYVITFCP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.39794
Match: 2ahnA
Description: No description for 2ahnA was found.

Predicted Domain #2
Region A:
Residues: [249-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPNTSQKSSQ DQSPDPKPTT PTGTSSTTPA GDSSTTWSPV DTSMIYEGAL DQNKGSPSTC  60
   61 HLSLCGITVT LALAFCRMWR LF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle